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Understanding the dynamic reorganization of brain networks is critical for predicting cognitive decline, neurological progression, and individual variability in clinical outcomes. This work proposes a multimodal graph neural network…

机器学习 · 计算机科学 2026-02-11 Preksha Girish , Rachana Mysore , Kiran K. N. , Hiranmayee R. , Shipra Prashanth , Shrey Kumar

Biological systems represent time from microseconds to years. An important gap in our knowledge concerns the mechanisms for encoding time intervals of hundreds of milliseconds to minutes that matter for tasks like navigation, communication,…

神经元与认知 · 定量生物学 2025-05-22 Raphaël Lafond-Mercier , Leonard Maler , Avner Wallach , André Longtin

Objective. Precise control of neural systems is essential to experimental investigations of how the brain controls behavior and holds the potential for therapeutic manipulations to correct aberrant network states. Model predictive control,…

神经元与认知 · 定量生物学 2024-08-06 Christof Fehrman , C. Daniel Meliza

Recurrent neural networks are powerful tools for understanding and modeling computation and representation by populations of neurons. Continuous-variable or "rate" model networks have been analyzed and applied extensively for these…

神经元与认知 · 定量生物学 2016-01-29 Brian DePasquale , Mark M. Churchland , L. F. Abbott

The dynamics of ideal four-wave mixing in optical fiber is reconstructed by taking advantage of the combination of experimental measurements with supervised machine learning strategies. The training data consist of power-dependent spectral…

光学 · 物理学 2022-12-21 Anastasiia Sheveleva , Pierre Colman , John M Dudley , Christophe Finot

For simulating large networks of neurons Hines proposed a method which uses extensively the structure of the arising systems of ordinary differential equations in order to obtain an efficient implementation. The original method requires…

数值分析 · 数学 2017-03-27 Michael Hanke

This paper introduces a biomathematical model designed to describe the internal dynamics of dream formation and spontaneous cognitive processes. The model incorporates neurocognitive factors such as dissatisfaction, acceptance, forgetting,…

神经元与认知 · 定量生物学 2025-05-12 Shirmohammad Tavangari , Sajjad Janfaza , Zahra Shakarami , Aref Yelghi

The neural network techniques are developed for artificial sequences based on approximate models of proteins. We only encode the hydrophobicity of the amino acid side chains without attempting to model the secondary structure. We use our…

软凝聚态物质 · 物理学 2024-07-17 R. G. Reilly , M. -T. Kechadi , Yu. A. Kuznetsov , E. G. Timoshenko , K. A. Dawson

Reconstructing noise-driven nonlinear networks from time series of output variables is a challenging problem, which turns to be very difficult when nonlinearity of dynamics, strong noise impacts and low measurement frequencies jointly…

统计力学 · 物理学 2017-10-20 Rundong Shi , Gang Hu , Shihong Wang

Repeating patterns of spike sequences from a neuronal network have been proposed to be useful in the reconstruction of the network topology. Reverberations in a physiologically realistic model with various physical connection topologies…

神经元与认知 · 定量生物学 2014-07-15 Hao Song , Chun-Chung Chen , Jyh-Jang Sun , Pik-Yin Lai , C. K. Chan

The effectiveness of recurrent neural networks can be largely influenced by their ability to store into their dynamical memory information extracted from input sequences at different frequencies and timescales. Such a feature can be…

机器学习 · 计算机科学 2020-07-01 Antonio Carta , Alessandro Sperduti , Davide Bacciu

A mechanism for self-organization of the degree of connectivity in model neural networks is studied. Network connectivity is regulated locally on the basis of an order parameter of the global dynamics which is estimated from an observable…

统计力学 · 物理学 2009-11-07 Stefan Bornholdt , Torsten Roehl

A general method for constructing simplicial complex from observed time series of dynamical systems based on the delay coordinate reconstruction procedure is presented. The obtained simplicial complex preserves all pertinent topological…

混沌动力学 · 物理学 2016-06-22 Slobodan Maletic , Yi Zhao , Milan Rajkovic

Many experiments have been performed that use evolutionary algorithms for learning the topology and connection weights of a neural network that controls a robot or virtual agent. These experiments are not only performed to better understand…

神经与进化计算 · 计算机科学 2019-05-23 Benjamin Inden , Jürgen Jost

The understanding of neural activity patterns is fundamentally linked to an understanding of how the brain's network architecture shapes dynamical processes. Established approaches rely mostly on deviations of a given network from certain…

神经元与认知 · 定量生物学 2014-09-19 Marc-Thorsten Huett , Marcus Kaiser , Claus C. Hilgetag

Recent work suggests goal-driven training of neural networks can be used to model neural activity in the brain. While response properties of neurons in artificial neural networks bear similarities to those in the brain, the network…

神经元与认知 · 定量生物学 2020-05-19 Christopher J. Cueva , Peter Y. Wang , Matthew Chin , Xue-Xin Wei

In this paper, we implement Neural Ordinary Differential Equations in a Variational Autoencoder setting for generative time series modeling. An object-oriented approach to the code was taken to allow for easier development and research and…

机器学习 · 计算机科学 2022-01-14 M. L. Garsdal , V. Søgaard , S. M. Sørensen

Spiking activity of neurons engaged in learning and performing a task show complex spatiotemporal dynamics. While the output of recurrent network models can learn to perform various tasks, the possible range of recurrent dynamics that…

神经元与认知 · 定量生物学 2018-08-21 Christopher Kim , Carson Chow

A challenging problem when studying a dynamical system is to find the interdependencies among its individual components. Several algorithms have been proposed to detect directed dynamical influences between time series. Two of the most used…

数据分析、统计与概率 · 物理学 2015-09-09 Alessandro Montalto , Sebastiano Stramaglia , Luca Faes , Giovanni Tessitore , Roberto Prevete , Daniele Marinazzo

Understanding how biological and artificial neural networks implement computation from connectivity is a central problem in neuroscience and machine learning. In neural systems, structural and functional connectivity are known to diverge,…

神经与进化计算 · 计算机科学 2026-05-07 Jatin Sharma , Dan F. M Goodman , Danyal Akarca
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