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Significant scientific discoveries have driven the progress of human civilisation. The explosion of scientific literature and data has created information barriers across disciplines that have slowed the pace of scientific discovery. Large…

计算与语言 · 计算机科学 2023-11-13 Biqing Qi , Kaiyan Zhang , Haoxiang Li , Kai Tian , Sihang Zeng , Zhang-Ren Chen , Bowen Zhou

Large Language Models (LLMs) have recently demonstrated remarkable performance in general tasks across various fields. However, their effectiveness within specific domains such as drug development remains challenges. To solve these…

Large Language Models (LLMs), particularly Code LLMs, have demonstrated impressive performance in code generation. Current research primarily focuses on the correctness of generated code, while efficiency remains less explored. Recent works…

软件工程 · 计算机科学 2025-02-27 Tong Ye , Weigang Huang , Xuhong Zhang , Tengfei Ma , Peiyu Liu , Jianwei Yin , Wenhai Wang

With the advent of Large Language Models (LLMs), generating rule-based data for real-world applications has become more accessible. Due to the inherent ambiguity of natural language and the complexity of rule sets, especially in long…

计算与语言 · 计算机科学 2025-04-21 Teng Wang , Zhenqi He , Wing-Yin Yu , Xiaojin Fu , Xiongwei Han

Large Language Models (LLMs) and Vision Language Models (VLMs) have recently shown promising capabilities in various scientific domain. In particular, these advances have opened new opportunities in drug discovery, where the ability to…

人工智能 · 计算机科学 2026-05-13 Jueon Park , Wonjune Jang , Jiwoo Lee , Yein Park , Jaewoo Kang

Molecule discovery plays a crucial role in various scientific fields, advancing the design of tailored materials and drugs. However, most of the existing methods heavily rely on domain experts, require excessive computational cost, or…

计算与语言 · 计算机科学 2024-05-10 Jiatong Li , Yunqing Liu , Wenqi Fan , Xiao-Yong Wei , Hui Liu , Jiliang Tang , Qing Li

Molecule discovery is a pivotal research field, impacting everything from medicine to materials. Recently, Large Language Models (LLMs) have been widely adopted in molecular understanding and generation, serving as a bridge between the…

计算与语言 · 计算机科学 2026-04-29 Jiatong Li , Yunqing Liu , Wei Liu , Jingdi Le , Di Zhang , Wenqi Fan , Dongzhan Zhou , Yuqiang Li , Qing Li

Large Language Models (LLMs) possess strong representation and reasoning capabilities, but their application to structure-based drug design (SBDD) is limited by insufficient understanding of protein structures and unpredictable molecular…

机器学习 · 计算机科学 2026-01-27 Xuanning Hu , Anchen Li , Qianli Xing , Jinglong Ji , Hao Tuo , Bo Yang

Language models (LMs) are machine learning models designed to predict linguistic patterns by estimating the probability of word sequences based on large-scale datasets, such as text. LMs have a wide range of applications in natural language…

Large language models (LLMs), especially Explicit Long Chain-of-Thought (CoT) reasoning models like DeepSeek-R1 and QWQ, have demonstrated powerful reasoning capabilities, achieving impressive performance in commonsense reasoning and…

计算与语言 · 计算机科学 2025-08-13 Jiatong Li , Weida Wang , Qinggang Zhang , Junxian Li , Di Zhang , Changmeng Zheng , Shufei Zhang , Xiaoyong Wei , Qing Li

While large language models (LLMs) have integrated images, adapting them to graphs remains challenging, limiting their applications in materials and drug design. This difficulty stems from the need for coherent autoregressive generation…

机器学习 · 计算机科学 2024-10-08 Gang Liu , Michael Sun , Wojciech Matusik , Meng Jiang , Jie Chen

Collecting diverse human opinions is costly and challenging. This leads to a recent trend in exploiting large language models (LLMs) for generating diverse data for potential scalable and efficient solutions. However, the extent to which…

计算与语言 · 计算机科学 2024-10-15 Shirley Anugrah Hayati , Minhwa Lee , Dheeraj Rajagopal , Dongyeop Kang

Mathematical optimization is a powerful tool for structured decision-making across domains such as resource allocation and planning. Formulating optimization models faithful to reality, though, remains a significant bottleneck as it…

人工智能 · 计算机科学 2026-05-27 Eleni Straitouri , Cheol Woo Kim , Milind Tambe

Large Language Models (LLMs) encounter challenges with the unique syntax of specific domains, such as biomolecules. Existing fine-tuning or modality alignment techniques struggle to bridge the domain knowledge gap and understand complex…

生物大分子 · 定量生物学 2024-06-28 Jinzhe Liu , Xiangsheng Huang , Zhuo Chen , Yin Fang

Large Language Models (LLMs) have garnered remarkable advancements across diverse code-related tasks, known as Code LLMs, particularly in code generation that generates source code with LLM from natural language descriptions. This…

计算与语言 · 计算机科学 2025-10-28 Juyong Jiang , Fan Wang , Jiasi Shen , Sungju Kim , Sunghun Kim

Large language models (LLMs) have shown exceptional performance across various text generation tasks but remain under-explored in the patent domain, which offers highly structured and precise language. This paper constructs a dataset to…

计算与语言 · 计算机科学 2025-05-27 Lekang Jiang , Caiqi Zhang , Pascal A Scherz , Stephan Goetz

Large Language Models (LLMs) represent an advanced evolution of earlier, simpler language models. They boast enhanced abilities to handle complex language patterns and generate coherent text, images, audios, and videos. Furthermore, they…

密码学与安全 · 计算机科学 2024-03-01 Jun Huang , Jiawei Zhang , Qi Wang , Weihong Han , Yanchun Zhang

Analogical reasoning, the transfer of relational structures across contexts (e.g., planet is to sun as electron is to nucleus), is fundamental to scientific discovery. Yet human insight is often constrained by domain expertise and…

机器学习 · 计算机科学 2025-10-28 Hongyu Guo

Topic modelling, as a well-established unsupervised technique, has found extensive use in automatically detecting significant topics within a corpus of documents. However, classic topic modelling approaches (e.g., LDA) have certain…

计算与语言 · 计算机科学 2024-03-27 Yida Mu , Chun Dong , Kalina Bontcheva , Xingyi Song

As the significance of understanding the cause-and-effect relationships among variables increases in the development of modern systems and algorithms, learning causality from observational data has become a preferred and efficient approach…

机器学习 · 计算机科学 2024-11-28 Xiaoxuan Li , Yao Liu , Ruoyu Wang , Lina Yao