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The development of robust and generalisable models for encoding the spatio-temporal dynamics of human brain activity is crucial for advancing neuroscientific discoveries. However, significant individual variation in the organisation of the…

图像与视频处理 · 电气工程与系统科学 2024-06-12 Simon Dahan , Logan Z. J. Williams , Yourong Guo , Daniel Rueckert , Emma C. Robinson

State Space Models (SSMs) have recently emerged as an alternative to Vision Transformers (ViTs) due to their unique ability of modeling global relationships with linear complexity. SSMs are specifically designed to capture spatially…

In medical imaging, most of the image registration methods implicitly assume a one-to-one correspondence between the source and target images (i.e., diffeomorphism). However, this is not necessarily the case when dealing with pathological…

图像与视频处理 · 电气工程与系统科学 2022-02-03 Matthis Maillard , Anton François , Joan Glaunès , Isabelle Bloch , Pietro Gori

This paper presents SimMIM, a simple framework for masked image modeling. We simplify recently proposed related approaches without special designs such as block-wise masking and tokenization via discrete VAE or clustering. To study what let…

计算机视觉与模式识别 · 计算机科学 2022-04-19 Zhenda Xie , Zheng Zhang , Yue Cao , Yutong Lin , Jianmin Bao , Zhuliang Yao , Qi Dai , Han Hu

We propose Masked Siamese Networks (MSN), a self-supervised learning framework for learning image representations. Our approach matches the representation of an image view containing randomly masked patches to the representation of the…

Classification-based image retrieval systems are built by training convolutional neural networks (CNNs) on a relevant classification problem and using the distance in the resulting feature space as a similarity metric. However, in practical…

计算机视觉与模式识别 · 计算机科学 2018-10-23 Maxim Pisov , Gleb Makarchuk , Valery Kostjuchenko , Alexandra Dalechina , Andrey Golanov , Mikhail Belyaev

Clinical MRI frequently acquires anisotropic volumes with high in-plane resolution and low through-plane resolution to reduce acquisition time. Multiple orientations are therefore acquired to provide complementary anatomical information.…

图像与视频处理 · 电气工程与系统科学 2026-03-25 Heejong Kim , Abhishek Thanki , Roel van Herten , Daniel Margolis , Mert R Sabuncu

Recent advancements in large-scale Vision Transformers have made significant strides in improving pre-trained models for medical image segmentation. However, these methods face a notable challenge in acquiring a substantial amount of…

计算机视觉与模式识别 · 计算机科学 2023-07-25 Yiqing Wang , Zihan Li , Jieru Mei , Zihao Wei , Li Liu , Chen Wang , Shengtian Sang , Alan Yuille , Cihang Xie , Yuyin Zhou

Understanding brain dynamics is important for neuroscience and mental health. Functional magnetic resonance imaging (fMRI) enables the measurement of neural activities through blood-oxygen-level-dependent (BOLD) signals, which represent…

神经元与认知 · 定量生物学 2025-06-16 Yifei Sun , Daniel Chahine , Qinghao Wen , Tianming Liu , Xiang Li , Yixuan Yuan , Fernando Calamante , Jinglei Lv

Multimodal magnetic resonance imaging (MRI) constitutes the first line of investigation for clinicians in the care of brain tumors, providing crucial insights for surgery planning, treatment monitoring, and biomarker identification.…

计算机视觉与模式识别 · 计算机科学 2025-08-26 Lucas Robinet , Ahmad Berjaoui , Elizabeth Cohen-Jonathan Moyal

Decoding brain states from functional magnetic resonance imaging (fMRI) data is vital for advancing neuroscience and clinical applications. While traditional machine learning and deep learning approaches have made strides in leveraging the…

机器学习 · 计算机科学 2025-12-10 Danial Jafarzadeh Jazi , Maryam Hajiesmaeili

For personalized medicines, very crucial intrinsic information is present in high dimensional omics data which is difficult to capture due to the large number of molecular features and small number of available samples. Different types of…

机器学习 · 计算机科学 2022-02-04 Sayed Hashim , Muhammad Ali , Karthik Nandakumar , Mohammad Yaqub

Brain tumor segmentation remains a significant challenge, particularly in the context of multi-modal magnetic resonance imaging (MRI) where missing modality images are common in clinical settings, leading to reduced segmentation accuracy.…

图像与视频处理 · 电气工程与系统科学 2024-06-14 Zhongao Sun , Jiameng Li , Yuhan Wang , Jiarong Cheng , Qing Zhou , Chun Li

Brain tumors pose a significant threat to human life, therefore it is very much necessary to detect them accurately in the early stages for better diagnosis and treatment. Brain tumors can be detected by the radiologist manually from the…

计算机视觉与模式识别 · 计算机科学 2025-12-09 Sayan Das , Arghadip Biswas

Large-scale volumetric medical images with annotation are rare, costly, and time prohibitive to acquire. Self-supervised learning (SSL) offers a promising pre-training and feature extraction solution for many downstream tasks, as it only…

计算机视觉与模式识别 · 计算机科学 2023-03-16 Ke Yu , Li Sun , Junxiang Chen , Max Reynolds , Tigmanshu Chaudhary , Kayhan Batmanghelich

Volumetric reconstruction of fetal brains from multiple stacks of MR slices, acquired in the presence of almost unpredictable and often severe subject motion, is a challenging task that is highly sensitive to the initialization of…

图像与视频处理 · 电气工程与系统科学 2022-06-23 Junshen Xu , Daniel Moyer , P. Ellen Grant , Polina Golland , Juan Eugenio Iglesias , Elfar Adalsteinsson

State Space Models (SSMs) have the advantage of keeping linear computational complexity compared to attention modules in transformers, and have been applied to vision tasks as a new type of powerful vision foundation model. Inspired by the…

计算机视觉与模式识别 · 计算机科学 2024-09-30 Zheng Zhan , Zhenglun Kong , Yifan Gong , Yushu Wu , Zichong Meng , Hangyu Zheng , Xuan Shen , Stratis Ioannidis , Wei Niu , Pu Zhao , Yanzhi Wang

Brain tumors require an assessment to ensure timely diagnosis and effective patient treatment. Morphological factors such as size, location, texture, and variable appearance complicate tumor inspection. Medical imaging presents challenges,…

计算机视觉与模式识别 · 计算机科学 2025-06-27 Md. Zahid Hasan , Abdullah Tamim , D. M. Asadujjaman , Md. Mahfujur Rahman , Md. Abu Ahnaf Mollick , Nosin Anjum Dristi , Abdullah-Al-Noman

Automatic segmentation of brain glioma from multimodal MRI scans plays a key role in clinical trials and practice. Unfortunately, manual segmentation is very challenging, time-consuming, costly, and often inaccurate despite human expertise…

图像与视频处理 · 电气工程与系统科学 2020-12-08 Minh H. Vu , Tufve Nyholm , Tommy Löfstedt

Histopathology remains the gold standard for cancer diagnosis because it provides detailed cellular-level assessment of tissue morphology. However, manual histopathological examination is time-consuming, labour-intensive, and subject to…

计算机视觉与模式识别 · 计算机科学 2026-03-13 Ravi Mosalpuri , Mohammed Abdelsamea , Ahmed Karam Eldaly