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We introduce mesoscopic and macroscopic model equations of chemotaxis with anomalous subdiffusion for modelling chemically directed transport of biological organisms in changing chemical environments with diffusion hindered by traps or…

动力系统 · 数学 2012-12-03 T. A. M. Langlands , B. I. Henry

Multicellular migration and pattern formation play important roles in developmental biology, cancer metastasis and wound healing. To understand the collective cell dynamics in three dimensional extracellular matrix (ECM), we have developed…

组织与器官 · 定量生物学 2016-08-25 Amani A. Alobaidi , Bo Sun

Mathematical modelling has a long history in the context of collective cell migration, with applications throughout development, disease and regenerative medicine. The aim of modelling in this context is to provide a framework in which to…

定量方法 · 定量生物学 2025-06-24 Ruth E. Baker , Rebecca M. Crossley , Carles Falco , Simon F. Martina-Perez

Most cells possess the capacity to locomote. Alone or collectively, this allows them to adapt, to rearrange, and to explore their surroundings. The biophysical characterization of such motile processes, in health and disease, has so far…

生物物理 · 物理学 2021-05-05 Vincent E. Debets , Liesbeth M. C. Janssen , Cornelis Storm

The ability of eukaryotic cells to squeeze through constrictions is limited by the stiffness of their large and rigid nucleus. However, migrating cells are often able to overcome this limitation and pass through constrictions much smaller…

生物物理 · 物理学 2023-12-20 Sirine Amiri , Yirui Zhang , Andonis Gerardos , Cécile Sykes , Pierre Ronceray

In order to study the effect of cell elastic properties on the behavior of assemblies of motile cells, this paper describes an alternative to the cell phase field (CPF) \cite{Palmieri2015} we have previously proposed. The CPF is a…

软凝聚态物质 · 物理学 2019-05-23 Yony Bresler , Benoit Palmieri , Martin Grant

Cell movement, for example during embryogenesis or tumor metastasis, is a complex dynamical process resulting from an intricate interplay of multiple components of the cellular migration machinery. At first sight, the paths of migrating…

细胞行为 · 定量生物学 2009-04-17 Peter Dieterich , Rainer Klages , Roland Preuss , Albrecht Schwab

A major goal of modern computational biology is to simulate the collective behaviour of large cell populations starting from the intricate web of molecular interactions occurring at the microscopic level. In this paper we describe a…

生物物理 · 物理学 2007-05-23 Roberto Chignola , Edoardo Milotti

We have recorded the swarming-like collective migration of a large number of keratocytes (tissue cells obtained from the scales of goldfish) using long-term videomicroscopy. By increasing the overall density of the migrating cells, we have…

细胞行为 · 定量生物学 2009-11-13 Balint Szabo , Gergely J. Szollosi , Balazs Gonci , Zsofi Juranyi , David Selmeczi , Tamas Vicsek

In this work we upscale a prototypical kinetic transport equation which models a cell population moving in a fibrous environment with a chemo- or haptotactic signal influencing both the direction and the magnitude of the cell velocity. The…

偏微分方程分析 · 数学 2021-09-30 Anna Zhigun , Christina Surulescu

Epithelial monolayers are some of the best-studied models for collective cell migration due to their abundance in multicellular systems and their tractability. Experimentally, the collective migration of epithelial monolayers can be…

定量方法 · 定量生物学 2024-02-15 Simon F. Martina-Perez , Isaac B. Breinyn , Daniel J. Cohen , Ruth E. Baker

The migration of cells is relevant for processes such as morphogenesis, wound healing, and invasion of cancer cells. In order to move, single cells deform cyclically. However, it is not understood how these shape oscillations influence…

生物物理 · 物理学 2019-09-04 Matteo Campo , Simon K. Schnyder , John J. Molina , Thomas Speck , Ryoichi Yamamoto

Directed cell motion in response to an external chemical gradient occurs in many biological phenomena such as wound healing, angiogenesis, and cancer metastasis. Chemotaxis is often characterized by the accuracy, persistence, and speed of…

细胞行为 · 定量生物学 2019-06-19 Julien Varennes , Hye-ran Moon , Soutick Saha , Andrew Mugler , Bumsoo Han

We develop, clarify and test various aspects of cluster methods dynamical mean field methods using a soluble toy model as a benchmark. We find that the Cellular Dynamical Mean Field Theory (C-DMFT) converges very rapidly and compare its…

强关联电子 · 物理学 2009-11-07 Giulio Biroli , Gabriel Kotliar

Collective cell migration plays an essential role in vertebrate development, yet the extent to which dynamically changing microenvironments influence this phenomenon remains unclear. Observations of the distribution of the extracellular…

We propose a continuum model for pattern formation, based on the multiphase model framework, to explore in vitro cell patterning within an extracellular matrix. We demonstrate that, within this framework, chemotaxis-driven cell migration…

细胞行为 · 定量生物学 2022-11-21 Georgina Al-Badri , James B. Phillips , Rebecca J. Shipley , Nicholas C. Ovenden

There is increasing interest in the analysis of biological tissue, its organization and its dynamics with the help of mathematical models. In the ideal case emergent properties on the tissue scale can be derived from the cellular scale.…

组织与器官 · 定量生物学 2009-11-13 Tilo Beyer , Michael Meyer-Hermann

The collective migration of epithelial groups of cells plays a central role in processes such as embryo development, wound healing, and cancer invasion. While finite cell clusters are known to collectively migrate in response to external…

In many sensory systems, transmembrane receptors are spatially organized in large clusters. Such arrangement may facilitate signal amplification and the integration of multiple stimuli. However, this organization likely also affects the…

分子网络 · 定量生物学 2014-03-05 William Pontius , Michael W. Sneddon , Thierry Emonet

In this paper we propose a numerical study of macroscopic models for collective cell migration, focusing on a multi-dimensional pressureless Euler-type model with non-local interactions coupled with chemotaxis, rigorously derived from…

数值分析 · 数学 2025-08-06 Marta Menci , Roberto Natalini , Tommaso Tenna