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This paper reports on the use of prompt engineering and GPT-3.5 for biomedical query-focused multi-document summarisation. Using GPT-3.5 and appropriate prompts, our system achieves top ROUGE-F1 results in the task of obtaining…

计算与语言 · 计算机科学 2023-11-10 Diego Mollá

In medical dialogue summarization, summaries must be coherent and must capture all the medically relevant information in the dialogue. However, learning effective models for summarization require large amounts of labeled data which is…

计算与语言 · 计算机科学 2021-10-15 Bharath Chintagunta , Namit Katariya , Xavier Amatriain , Anitha Kannan

The proliferation of fake reviews of doctors has potentially detrimental consequences for patient well-being and has prompted concern among consumer protection groups and regulatory bodies. Yet despite significant advancements in the fields…

计算与语言 · 计算机科学 2023-04-21 Aishwarya Deep Shukla , Laksh Agarwal , Jie Mein , Goh , Guodong , Gao , Ritu Agarwal

Large language models, particularly GPT-3, are able to produce high quality summaries of general domain news articles in few- and zero-shot settings. However, it is unclear if such models are similarly capable in more specialized,…

计算与语言 · 计算机科学 2023-05-12 Chantal Shaib , Millicent L. Li , Sebastian Joseph , Iain J. Marshall , Junyi Jessy Li , Byron C. Wallace

Language models have become increasingly popular in recent years for tasks like information retrieval. As use-cases become oriented toward specific domains, fine-tuning becomes default for standard performance. To fine-tune these models for…

计算与语言 · 计算机科学 2023-01-02 Pranjali Awasthi , David Recio-Mitter , Yosuke Kyle Sugi

Purpose: Large language models (LLMs) have proven performance for certain diagnostic tasks, however limited studies have evaluated their consistency in recommending appropriate medication regimens for a given diagnosis. Medication…

Modern affective computing systems rely heavily on datasets with human-annotated emotion labels, for training and evaluation. However, human annotations are expensive to obtain, sensitive to study design, and difficult to quality control,…

计算与语言 · 计算机科学 2024-12-12 Minxue Niu , Yara El-Tawil , Amrit Romana , Emily Mower Provost

Background: Artificial intelligence language models have shown promise in various applications, including assisting with clinical decision-making as demonstrated by strong performance of large language models on medical licensure exams.…

计算与语言 · 计算机科学 2023-05-10 Timothy Poterucha , Pierre Elias , Christopher M. Haggerty

Prompt engineering is a crucial yet challenging task for optimizing the performance of large language models (LLMs) on customized tasks. This pioneering research introduces the Automatic Prompt Engineering Toolbox (APET), which enables…

计算与语言 · 计算机科学 2024-07-17 Daan Kepel , Konstantina Valogianni

Objective To solve major clinical natural language processing (NLP) tasks using a unified text-to-text learning architecture based on a generative large language model (LLM) via prompt tuning. Methods We formulated 7 key clinical NLP tasks…

计算与语言 · 计算机科学 2023-12-12 Cheng Peng , Xi Yang , Aokun Chen , Zehao Yu , Kaleb E Smith , Anthony B Costa , Mona G Flores , Jiang Bian , Yonghui Wu

Pre-trained large language models(LLMs) have attracted increasing attention in biomedical domains due to their success in natural language processing. However, the complex traits and heterogeneity of multi-sources genomics data pose…

Deep learning models have demonstrated superior performance in various healthcare applications. However, the major limitation of these deep models is usually the lack of high-quality training data due to the private and sensitive nature of…

计算与语言 · 计算机科学 2022-11-15 Qiuhao Lu , Dejing Dou , Thien Huu Nguyen

Recent advancements in the field of Natural Language Processing, particularly the development of large-scale language models that are pretrained on vast amounts of knowledge, are creating novel opportunities within the realm of Knowledge…

计算与语言 · 计算机科学 2023-10-06 Anisa Rula , Jennifer D'Souza

Large language models (LLMs) have demonstrated remarkable success in NLP tasks. However, there is a paucity of studies that attempt to evaluate their performances on social media-based health-related natural language processing tasks, which…

计算与语言 · 计算机科学 2024-03-29 Yuting Guo , Anthony Ovadje , Mohammed Ali Al-Garadi , Abeed Sarker

Automatic phenotype concept recognition from unstructured text remains a challenging task in biomedical text mining research. Previous works that address the task typically use dictionary-based matching methods, which can achieve high…

Large language models like GPT-3.5-turbo and GPT-4 hold promise for healthcare professionals, but they may inadvertently inherit biases during their training, potentially affecting their utility in medical applications. Despite few attempts…

计算与语言 · 计算机科学 2024-09-18 Yifan Yang , Xiaoyu Liu , Qiao Jin , Furong Huang , Zhiyong Lu

Objective: This study quantifies the capabilities of GPT-3.5 and GPT-4 for clinical named entity recognition (NER) tasks and proposes task-specific prompts to improve their performance. Materials and Methods: We evaluated these models on…

Manual digitisation of structured handwritten documents is slow and costly. We benchmark 17 leading frontier multi-modal large language models and open-source models against a very challenging real-world medical form that mixes dates;…

计算机视觉与模式识别 · 计算机科学 2026-04-21 Nicholas Pather , Joshua Fouché , Sitwala Mundia , Karl-Günter Technau , Thokozile Malaba , Alex Welte , Ushma Mehta , Bruce A. Bassett

Background: Biomedical entity normalization is critical to biomedical research because the richness of free-text clinical data, such as progress notes, can often be fully leveraged only after translating words and phrases into structured…

计算与语言 · 计算机科学 2024-05-27 Nicholas J Dobbins

Both medical care and observational studies in oncology require a thorough understanding of a patient's disease progression and treatment history, often elaborately documented in clinical notes. Despite their vital role, no current oncology…

计算与语言 · 计算机科学 2024-03-18 Madhumita Sushil , Vanessa E. Kennedy , Divneet Mandair , Brenda Y. Miao , Travis Zack , Atul J. Butte