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Artificial intelligence has demonstrated immense potential in scientific research. Within molecular science, it is revolutionizing the traditional computer-aided paradigm, ushering in a new era of deep learning. With recent progress in…

生物大分子 · 定量生物学 2024-03-22 Yi Xiao , Xiangxin Zhou , Qiang Liu , Liang Wang

We introduce UniGen, a unified multimodal large language model (MLLM) capable of image understanding and generation. We study the full training pipeline of UniGen from a data-centric perspective, including multi-stage pre-training,…

计算机视觉与模式识别 · 计算机科学 2025-05-21 Rui Tian , Mingfei Gao , Mingze Xu , Jiaming Hu , Jiasen Lu , Zuxuan Wu , Yinfei Yang , Afshin Dehghan

Multimodal large language models (MLLMs) have gained significant attention due to their strong multimodal understanding capability. However, existing works rely heavily on modality-specific encoders, which usually differ in architecture and…

计算机视觉与模式识别 · 计算机科学 2025-01-10 Jiaming Han , Kaixiong Gong , Yiyuan Zhang , Jiaqi Wang , Kaipeng Zhang , Dahua Lin , Yu Qiao , Peng Gao , Xiangyu Yue

Recent advances in large language models (LLMs) have enabled breakthroughs in many multimodal generation tasks, but a significant performance gap still exists in text-to-motion generation, where LLM-based methods lag far behind non-LLM…

计算机视觉与模式识别 · 计算机科学 2025-06-24 Chuhao Jin , Haosen Li , Bingzi Zhang , Che Liu , Xiting Wang , Ruihua Song , Wenbing Huang , Ying Qin , Fuzheng Zhang , Di Zhang

Significant interests have recently risen in leveraging sequence-based large language models (LLMs) for drug design. However, most current applications of LLMs in drug discovery lack the ability to comprehend three-dimensional (3D)…

Large multimodal models (LMMs) combine unimodal encoders and large language models (LLMs) to perform multimodal tasks. Despite recent advancements towards the interpretability of these models, understanding internal representations of LMMs…

机器学习 · 计算机科学 2024-12-03 Jayneel Parekh , Pegah Khayatan , Mustafa Shukor , Alasdair Newson , Matthieu Cord

Most current molecular language models transfer the masked language model or image-text generation model from natural language processing to molecular field. However, molecules are not solely characterized by atom/bond symbols; they…

新兴技术 · 计算机科学 2024-11-26 Yifan Wu , Min Zeng , Yang Li , Yang Zhang , Min Li

This research paper addresses the challenge of modality mismatch in multimodal learning, where the modalities available during inference differ from those available at training. We propose the Text-centric Alignment for Multi-Modality…

机器学习 · 计算机科学 2024-05-22 Yun-Da Tsai , Ting-Yu Yen , Pei-Fu Guo , Zhe-Yan Li , Shou-De Lin

The rapid advancement of large language models (LLMs) has intensified the need for effective mechanisms to transform continuous multimodal data into discrete representations suitable for language-based processing. Discrete tokenization,…

计算与语言 · 计算机科学 2025-08-01 Jindong Li , Yali Fu , Jiahong Liu , Linxiao Cao , Wei Ji , Menglin Yang , Irwin King , Ming-Hsuan Yang

Tokenization is a foundational step in the text process of Large Language Models (LLMs). Texts must be first tokenized into token IDs, which are then input to LLMs. Inefficient tokenization results in long token-ID sequences and will slow…

计算与语言 · 计算机科学 2026-05-14 Chong Li , Yingzhuo Deng , Wen Yang , Jiajun Zhang , Chengqing Zong

Large Language Models (LLMs) are central to the one-for-all intelligent paradigm, but they face a fundamental challenge when dealing with heterogeneous scientific data such as molecules: the inherent gap between discrete linguistic symbols…

人工智能 · 计算机科学 2026-05-22 Yuxuan Chen , Changwei Lv , Yunduo Xiao , Zhongjing Du , Daquan Zhou , Yukun Yan , Zheni Zeng , Zhiyuan Liu

We introduce UniMuMo, a unified multimodal model capable of taking arbitrary text, music, and motion data as input conditions to generate outputs across all three modalities. To address the lack of time-synchronized data, we align unpaired…

声音 · 计算机科学 2024-10-08 Han Yang , Kun Su , Yutong Zhang , Jiaben Chen , Kaizhi Qian , Gaowen Liu , Chuang Gan

Language Models (LMs) have demonstrated impressive molecule understanding ability on various 1D text-related tasks. However, they inherently lack 2D graph perception - a critical ability of human professionals in comprehending molecules'…

计算与语言 · 计算机科学 2024-01-19 Zhiyuan Liu , Sihang Li , Yanchen Luo , Hao Fei , Yixin Cao , Kenji Kawaguchi , Xiang Wang , Tat-Seng Chua

Molecular optimization is a crucial yet complex and time-intensive process that often acts as a bottleneck for drug development. Traditional methods rely heavily on trial and error, making multi-objective optimization both time-consuming…

生物大分子 · 定量生物学 2025-03-06 Jiajun Yu , Yizhen Zheng , Huan Yee Koh , Shirui Pan , Tianyue Wang , Haishuai Wang

While various models and computational tools have been proposed for structure and property analysis of molecules, generating molecules that conform to all desired structures and properties remains a challenge. Here, we introduce a…

Recent advancements in large language models (LLMs) have remarkably enhanced performances on a variety of tasks in multiple languages. However, tokenizers in LLMs trained primarily on English-centric corpora often overly fragment a text…

计算与语言 · 计算机科学 2024-08-07 Jimin Hong , Gibbeum Lee , Jaewoong Cho

The development of large language models and multi-modal models has enabled the appealing idea of generating novel molecules from text descriptions. Generative modeling would shift the paradigm from relying on large-scale chemical screening…

机器学习 · 计算机科学 2025-08-25 Yifan Deng , Spencer S. Ericksen , Anthony Gitter

Recent advances in product bundling have leveraged multimodal information through sophisticated encoders, but remain constrained by limited semantic understanding and a narrow scope of knowledge. Therefore, some attempts employ In-context…

信息检索 · 计算机科学 2025-02-04 Xiaohao Liu , Jie Wu , Zhulin Tao , Yunshan Ma , Yinwei Wei , Tat-seng Chua

Large language models (LLMs), especially Explicit Long Chain-of-Thought (CoT) reasoning models like DeepSeek-R1 and QWQ, have demonstrated powerful reasoning capabilities, achieving impressive performance in commonsense reasoning and…

计算与语言 · 计算机科学 2025-08-13 Jiatong Li , Weida Wang , Qinggang Zhang , Junxian Li , Di Zhang , Changmeng Zheng , Shufei Zhang , Xiaoyong Wei , Qing Li

Current vision-language models have been explored for multi-modal embedding tasks like information retrieval. However, they face significant challenges in real-world queries and targets involving diverse modality combinations, as existing…

计算机视觉与模式识别 · 计算机科学 2026-05-07 Jiajun Qin , Yuan Pu , Zhuolun He , Seunggeun Kim , David Z. Pan , Bei Yu