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With the increasing amount of data available to scientists in disciplines as diverse as bioinformatics, physics, and remote sensing, scientific workflow systems are becoming increasingly important for composing and executing scalable data…

分布式、并行与集群计算 · 计算机科学 2024-03-20 Jonathan Bader , Nils Diedrich , Lauritz Thamsen , Odej Kao

Scientific workflow management systems support large-scale data analysis on cluster infrastructures. For this, they interact with resource managers which schedule workflow tasks onto cluster nodes. In addition to workflow task descriptions,…

分布式、并行与集群计算 · 计算机科学 2025-04-30 Jonathan Bader , Kathleen West , Soeren Becker , Svetlana Kulagina , Fabian Lehmann , Lauritz Thamsen , Henning Meyerhenke , Odej Kao

As the amount of available data continues to grow in fields as diverse as bioinformatics, physics, and remote sensing, the importance of scientific workflows in the design and implementation of reproducible data analysis pipelines…

分布式、并行与集群计算 · 计算机科学 2025-02-11 Jonathan Bader , Fabian Skalski , Fabian Lehmann , Dominik Scheinert , Jonathan Will , Lauritz Thamsen , Odej Kao

Scientific workflow management systems enable the reproducible execution of data analysis pipelines on cluster infrastructures managed by resource managers such as Kubernetes, Slurm, or HTCondor. These resource managers require resource…

分布式、并行与集群计算 · 计算机科学 2024-10-03 Jonathan Bader , Ansgar Lößer , Lauritz Thamsen , Björn Scheuermann , Odej Kao

Many algorithms in workflow scheduling and resource provisioning rely on the performance estimation of tasks to produce a scheduling plan. A profiler that is capable of modeling the execution of tasks and predicting their runtime…

分布式、并行与集群计算 · 计算机科学 2019-03-01 Muhammad H. Hilman , Maria A. Rodriguez , Rajkumar Buyya

The collaborative efforts of large communities in science experiments, often comprising thousands of global members, reflect a monumental commitment to exploration and discovery. Recently, advanced and complex data processing has gained…

Scientific workflows are designed as directed acyclic graphs (DAGs) and consist of multiple dependent task definitions. They are executed over a large amount of data, often resulting in thousands of tasks with heterogeneous compute…

分布式、并行与集群计算 · 计算机科学 2023-07-19 Jonathan Bader , Nicolas Zunker , Soeren Becker , Odej Kao

Scientific workflows are pipelines of interdependent tasks. They are increasingly executed on shared Kubernetes clusters via workflow engines such as Nextflow. Their energy consumption matters for both cost and sustainability. It is…

分布式、并行与集群计算 · 计算机科学 2026-05-22 Philipp Thamm , Somayeh Mohammadi , Kathleen West , Knut Reinert , Lauritz Thamsen , Ulf Leser

Scientific workflows process extensive data sets over clusters of independent nodes, which requires a complex stack of infrastructure components, especially a resource manager (RM) for task-to-node assignment, a distributed file system…

In the recent years, scientific workflows gained more and more popularity. In scientific workflows, tasks are typically treated as black boxes. Dealing with their complex interrelations to identify optimization potentials and bottlenecks is…

分布式、并行与集群计算 · 计算机科学 2022-09-13 Ansgar Lößer , Joel Witzke , Florian Schintke , Björn Scheuermann

In standard neural networks the amount of computation used grows with the size of the inputs, but not with the complexity of the problem being learnt. To overcome this limitation we introduce PonderNet, a new algorithm that learns to adapt…

机器学习 · 计算机科学 2021-09-03 Andrea Banino , Jan Balaguer , Charles Blundell

Scientific workflows are critical to scientific data analysis and often involve computationally intensive processing of large datasets on compute clusters. As such, their execution tends to be long-running and resource-intensive, resulting…

分布式、并行与集群计算 · 计算机科学 2026-03-09 Kathleen West , Youssef Moawad , Fabian Lehmann , Vasilis Bountris , Ulf Leser , Yehia Elkhatib , Lauritz Thamsen

Scientific workflow management systems like Nextflow support large-scale data analysis by abstracting away the details of scientific workflows. In these systems, workflows consist of several abstract tasks, of which instances are run in…

分布式、并行与集群计算 · 计算机科学 2022-01-20 Jonathan Bader , Lauritz Thamsen , Svetlana Kulagina , Jonathan Will , Henning Meyerhenke , Odej Kao

Scientific workflows are widely used to automate scientific data analysis and often involve processing large quantities of data on compute clusters. As such, their execution tends to be long-running and resource intensive, leading to…

分布式、并行与集群计算 · 计算机科学 2025-03-20 Kathleen West , Fabian Lehmann , Vasilis Bountris , Ulf Leser , Yehia Elkhatib , Lauritz Thamsen

Failed workloads that consumed significant computational resources in time and space affect the efficiency of data centers significantly and thus limit the amount of scientific work that can be achieved. While the computational power has…

分布式、并行与集群计算 · 计算机科学 2023-01-13 Jie Li , Rui Wang , Ghazanfar Ali , Tommy Dang , Alan Sill , Yong Chen

The prevalence of scientific workflows with high computational demands calls for their execution on various distributed computing platforms, including large-scale leadership-class high-performance computing (HPC) clusters. To handle the…

Workflows provide an expressive programming model for fine-grained control of large-scale applications in distributed computing environments. Accurate estimates of complex workflow execution metrics on large-scale machines have several key…

分布式、并行与集群计算 · 计算机科学 2018-04-18 Alok Singh , Mai Nguyen , Shweta Purawat , Daniel Crawl , Ilkay Altintas

Datacenters execute large computational jobs, which are composed of smaller tasks. A job completes when all its tasks finish, so stragglers -- rare, yet extremely slow tasks -- are a major impediment to datacenter performance. Accurately…

机器学习 · 计算机科学 2022-08-16 Yi Ding , Avinash Rao , Hyebin Song , Rebecca Willett , Henry Hoffmann

Over the last two decades, scientific workflow management systems (SWfMS) have emerged as a means to facilitate the design, execution, and monitoring of reusable scientific data processing pipelines. At the same time, the amounts of data…

分布式、并行与集群计算 · 计算机科学 2013-03-29 Marc Bux , Ulf Leser

Process mining enables the reconstruction and evaluation of business processes based on digital traces in IT systems. An increasingly important technique in this context is process prediction. Given a sequence of events of an ongoing trace,…

机器学习 · 计算机科学 2021-06-09 Dominic A. Neu , Johannes Lahann , Peter Fettke
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