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Electronic health records (EHRs) recorded in hospital settings typically contain a wide range of numeric time series data that is characterized by high sparsity and irregular observations. Effective modelling for such data must exploit its…

Foundation models serve as the backbone for numerous specialized models developed through fine-tuning. However, when the underlying pretrained model is updated or retrained (e.g., on larger and more curated datasets), the fine-tuned model…

Tabular data are fundamental in common machine learning applications, ranging from finance to genomics and healthcare. This paper focuses on tabular regression tasks, a field where deep learning (DL) methods are not consistently superior to…

机器学习 · 计算机科学 2024-12-17 Hong-Wei Wu , Wei-Yao Wang , Kuang-Da Wang , Wen-Chih Peng

Many diseases, including cancer and chronic conditions, require extended treatment periods and long-term strategies. Machine learning and AI research focusing on electronic health records (EHRs) have emerged to address this need. Effective…

The rise of deep learning has marked significant progress in fields such as computer vision, natural language processing, and medical imaging, primarily through the adaptation of pre-trained models for specific tasks. Traditional…

机器学习 · 计算机科学 2024-04-25 Charith Chandra Sai Balne , Sreyoshi Bhaduri , Tamoghna Roy , Vinija Jain , Aman Chadha

Large Transformers pretrained over clinical notes from Electronic Health Records (EHR) have afforded substantial gains in performance on predictive clinical tasks. The cost of training such models (and the necessity of data access to do so)…

计算与语言 · 计算机科学 2021-04-26 Eric Lehman , Sarthak Jain , Karl Pichotta , Yoav Goldberg , Byron C. Wallace

Electronic health records (EHR) are widely believed to hold a profusion of actionable insights, encrypted in an irregular, semi-structured format, amidst a loud noise background. To simplify learning patterns of health and disease, medical…

计算与语言 · 计算机科学 2022-12-13 David A. Bloore , Romane Gauriau , Anna L. Decker , Jacob Oppenheim

The increased availability of electronic health records (EHRs) have spearheaded the initiative for precision medicine using data driven approaches. Essential to this effort is the ability to identify patients with certain medical conditions…

Deep learning models have shown tremendous potential in learning representations, which are able to capture some key properties of the data. This makes them great candidates for transfer learning: Exploiting commonalities between different…

The visual models pretrained on large-scale benchmarks encode general knowledge and prove effective in building more powerful representations for downstream tasks. Most existing approaches follow the fine-tuning paradigm, either by…

计算机视觉与模式识别 · 计算机科学 2023-08-24 Nan Zhou , Jiaxin Chen , Di Huang

The widespread adoption of electronic health records (EHRs) enables the acquisition of heterogeneous clinical data, spanning lab tests, vital signs, medications, and procedures, which offer transformative potential for artificial…

信号处理 · 电气工程与系统科学 2026-03-17 Mingcheng Zhu , Yu Liu , Zhiyao Luo , Tingting Zhu

For the task of fine-grained entity typing (FET), due to the use of a large number of entity types, it is usually considered too costly to manually annotating a training dataset that contains an ample number of examples for each type. A…

计算与语言 · 计算机科学 2023-12-12 Hongliang Dai , Ziqian Zeng

Despite recent advancements in the field of medical image analysis with the use of pretrained foundation models, the issue of distribution shifts between cross-source images largely remains adamant. To circumvent that issue, investigators…

计算机视觉与模式识别 · 计算机科学 2026-04-14 Sanjaya Poudel , Nikita Kunwor , Raj Simkhada , Mustafa Munir , Manish Dhakal , Khem Poudel

Annotating histopathological images is a time-consuming andlabor-intensive process, which requires broad-certificated pathologistscarefully examining large-scale whole-slide images from cells to tissues.Recent frontiers of transfer learning…

计算机视觉与模式识别 · 计算机科学 2020-08-24 Dou Xu , Chang Cai , Chaowei Fang , Bin Kong , Jihua Zhu , Zhongyu Li

The success of large-scale pre-trained models has established fine-tuning as a standard method for achieving significant improvements in downstream tasks. However, fine-tuning the entire parameter set of a pre-trained model is costly.…

计算机视觉与模式识别 · 计算机科学 2025-07-17 Yijin Huang , Pujin Cheng , Roger Tam , Xiaoying Tang

Continual Learning enables models to learn and adapt to new tasks while retaining prior knowledge. Introducing new tasks, however, can naturally lead to feature entanglement across tasks, limiting the model's capability to distinguish…

机器学习 · 计算机科学 2025-01-14 Zhongyi Zhou , Yaxin Peng , Pin Yi , Minjie Zhu , Chaomin Shen

We present a comprehensive analysis of deep learning approaches for Electronic Health Record (EHR) time-series imputation, examining how architectural and framework biases combine to influence model performance. Our investigation reveals…

机器学习 · 计算机科学 2025-02-05 Linglong Qian , Tao Wang , Jun Wang , Hugh Logan Ellis , Robin Mitra , Richard Dobson , Zina Ibrahim

Electronic health records (EHRs) have become a platform for data-driven surveillance on a granular level in recent years. In this paper, we make use of EHRs for early prevention of childhood obesity. The proposed method simultaneously…

统计方法学 · 统计学 2019-04-16 Young-Geun Choi , Lawrence P. Hanrahan , Derek Norton , Ying-Qi Zhao

We consider small-data, large-scale decision problems in which a firm must make many operational decisions simultaneously (e.g., across a large product portfolio) while observing only a few, potentially noisy, data points per instance.…

机器学习 · 计算机科学 2026-02-04 Zishi Zhang , Jinhui Han , Ming Hu , Yijie Peng

Graphs are a central representation in biomedical research, capturing molecular interaction networks, gene regulatory circuits, cell--cell communication maps, and knowledge graphs. Despite their importance, currently there is not a broadly…

机器学习 · 计算机科学 2026-04-09 Sakib Mostafa , Lei Xing , Md. Tauhidul Islam