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This article introduces a highly parallel algorithm for molecular dynamics simulations with short-range forces on single node multi- and many-core systems. The algorithm is designed to achieve high parallel speedups for strongly…

计算物理 · 物理学 2013-11-20 R. Meyer

Efficient and real time segmentation of color images has a variety of importance in many fields of computer vision such as image compression, medical imaging, mapping and autonomous navigation. Being one of the most computationally…

计算机视觉与模式识别 · 计算机科学 2017-10-09 Roopal Nahar , Akanksha Baranwal , K. Madhava Krishna

The availability of larger and larger graph datasets, growing exponentially over the years, has created several new algorithmic challenges to be addressed. Sequential approaches have become unfeasible, while interest on parallel and…

分布式、并行与集群计算 · 计算机科学 2014-03-26 Alessio Guerrieri , Alberto Montresor

Cortical circuits exhibit intricate recurrent architectures that are remarkably similar across different brain areas. Such stereotyped structure suggests the existence of common computational principles. However, such principles have…

神经元与认知 · 定量生物学 2018-01-04 Rui Ponte Costa , Yannis M. Assael , Brendan Shillingford , Nando de Freitas , Tim P. Vogels

Finding frequently occurring subgraph patterns or network motifs in neural architectures is crucial for optimizing efficiency, accelerating design, and uncovering structural insights. However, as the subgraph size increases,…

机器学习 · 计算机科学 2026-02-04 Yikang Yang , Zhengxin Yang , Minghao Luo , Luzhou Peng , Hongxiao Li , Wanling Gao , Lei Wang , Jianfeng Zhan

Problems in scientific computing, such as distributing large sparse matrix operations, have analogous formulations as hypergraph partitioning problems. A hypergraph is a generalization of a traditional graph wherein "hyperedges" may connect…

数据结构与算法 · 计算机科学 2022-06-16 Justin Sybrandt , Ruslan Shaydulin , Ilya Safro

Graph Neural Networks (GNNs) have emerged as powerful tools for various graph mining tasks, yet existing scalable solutions often struggle to balance execution efficiency with prediction accuracy. These difficulties stem from iterative…

机器学习 · 计算机科学 2026-04-02 Xu Cheng , Liang Yao , Feng He , Yukuo Cen , Yufei He , Chenhui Zhang , Wenzheng Feng , Hongyun Cai , Jie Tang

The rise of graph analytic systems has created a need for ways to measure and compare the capabilities of these systems. Graph analytics present unique scalability difficulties. The machine learning, high performance computing, and visual…

We present TeraPart, a memory-efficient multilevel graph partitioning method that is designed to scale to extremely large graphs. In balanced graph partitioning, the goal is to divide the vertices into $k$ blocks with balanced size while…

数据结构与算法 · 计算机科学 2024-10-28 Daniel Salwasser , Daniel Seemaier , Lars Gottesbüren , Peter Sanders

The modeling flexibility provided by hypergraphs has drawn a lot of interest from the combinatorial scientific community, leading to novel models and algorithms, their applications, and development of associated tools. Hypergraphs are now a…

数据结构与算法 · 计算机科学 2015-03-19 Enver Kayaaslan , Ali Pinar , Umit V. Catalyurek , Cevdet Aykanat

Robots operating in unstructured environments often require accurate and consistent object-level representations. This typically requires segmenting individual objects from the robot's surroundings. While recent large models such as Segment…

机器人学 · 计算机科学 2025-04-07 Haozhan Tang , Tianyi Zhang , Oliver Kroemer , Matthew Johnson-Roberson , Weiming Zhi

Subgraph matching is vital in knowledge graph (KG) question answering, molecule design, scene graph, code and circuit search, etc. Neural methods have shown promising results for subgraph matching. Our study of recent systems suggests…

机器学习 · 计算机科学 2025-10-28 Vaibhav Raj , Indradyumna Roy , Ashwin Ramachandran , Soumen Chakrabarti , Abir De

Cortical surface registration is a fundamental tool for neuroimaging analysis that has been shown to improve the alignment of functional regions relative to volumetric approaches. Classically, image registration is performed by optimizing a…

计算机视觉与模式识别 · 计算机科学 2022-03-25 Mohamed A. Suliman , Logan Z. J. Williams , Abdulah Fawaz , Emma C. Robinson

The remarkable growth and significant success of machine learning have expanded its applications into programming languages and program analysis. However, a key challenge in adopting the latest machine learning methods is the representation…

编程语言 · 计算机科学 2023-12-01 Ali TehraniJamsaz , Quazi Ishtiaque Mahmud , Le Chen , Nesreen K. Ahmed , Ali Jannesari

Huge neural network models have shown unprecedented performance in real-world applications. However, due to memory constraints, model parallelism must be utilized to host large models that would otherwise not fit into the memory of a single…

机器学习 · 计算机科学 2021-04-13 Qifan Xu , Shenggui Li , Chaoyu Gong , Yang You

Executing Spiking Neural Networks (SNNs) on neuromorphic hardware poses the problem of mapping neurons to cores. SNNs operate by propagating spikes between neurons that form a graph through synapses. Neuromorphic hardware mimics them…

硬件体系结构 · 计算机科学 2026-04-22 Marco Ronzani , Cristina Silvano

Graph neural networks (GNNs) have been demonstrated as a powerful tool for analyzing non-Euclidean graph data. However, the lack of efficient distributed graph learning systems severely hinders applications of GNNs, especially when graphs…

Heterogeneous graphs are ubiquitous in real-world applications because they can represent various relationships between different types of entities. Therefore, learning embeddings in such graphs is a critical problem in graph machine…

机器学习 · 计算机科学 2024-04-02 Yue Zhang , Yuntian He , Saket Gurukar , Srinivasan Parthasarathy

Evaluating high-dimensional integrals via deep hierarchical recurrences is a dominant cost in quantum chemistry. While CPUs manage these efficiently, GPUs suffer a critical mismatch: limited per-thread memory is quickly overwhelmed by an…

计算物理 · 物理学 2026-05-14 Yihong Zhang , Xinran Wei , Junshi Chen , Fusong Ju , Wei Hu , Jinlong Yang , Huanhuan Xia

Enhancing the efficiency of iterative computation on graphs has garnered considerable attention in both industry and academia. Nonetheless, the majority of efforts focus on expediting iterative computation by minimizing the running time per…

分布式、并行与集群计算 · 计算机科学 2024-07-23 Yijie Zhou , Shufeng Gong , Feng Yao , Hanzhang Chen , Song Yu , Pengxi Liu , Yanfeng Zhang , Ge Yu , Jeffrey Xu Yu