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High-resolution slice-to-volume reconstruction (SVR) from multiple motion-corrupted low-resolution 2D slices constitutes a critical step in image-based diagnostics of moving subjects, such as fetal brain Magnetic Resonance Imaging (MRI).…

In magnetic resonance imaging (MRI), slice-to-volume reconstruction (SVR) refers to computational reconstruction of an unknown 3D magnetic resonance volume from stacks of 2D slices corrupted by motion. While promising, current SVR methods…

图像与视频处理 · 电气工程与系统科学 2024-02-29 Sean I. Young , Yaël Balbastre , Bruce Fischl , Polina Golland , Juan Eugenio Iglesias

Volumetric reconstruction of fetal brains from multiple stacks of MR slices, acquired in the presence of almost unpredictable and often severe subject motion, is a challenging task that is highly sensitive to the initialization of…

图像与视频处理 · 电气工程与系统科学 2022-06-23 Junshen Xu , Daniel Moyer , P. Ellen Grant , Polina Golland , Juan Eugenio Iglesias , Elfar Adalsteinsson

High-quality 3D fetal brain MRI reconstruction from motion-corrupted 2D slices is crucial for clinical diagnosis. Reliable slice-to-volume registration (SVR)-based motion correction and super-resolution reconstruction (SRR) methods are…

图像与视频处理 · 电气工程与系统科学 2025-05-27 Jiangjie Wu , Lixuan Chen , Zhenghao Li , Xin Li , Saban Ozturk , Lihui Wang , Rongpin Wang , Hongjiang Wei , Yuyao Zhang

Fully convolutional networks have become the backbone of modern medical imaging due to their ability to learn multi-scale representations and perform end-to-end inference. Yet their potential for slice-to-volume reconstruction (SVR), the…

图像与视频处理 · 电气工程与系统科学 2026-01-13 Margherita Firenze , Sean I. Young , Clinton J. Wang , Hyuk Jin Yun , Elfar Adalsteinsson , Kiho Im , P. Ellen Grant , Polina Golland

2D to 3D registration is essential in tasks such as diagnosis, surgical navigation, environmental understanding, navigation in robotics, autonomous systems, or augmented reality. In medical imaging, the aim is often to place a 2D image in a…

计算机视觉与模式识别 · 计算机科学 2024-10-25 Stefan Brandstätter , Philipp Seeböck , Christoph Fürböck , Svitlana Pochepnia , Helmut Prosch , Georg Langs

In in-utero MRI, motion correction for fetal body and placenta poses a particular challenge due to the presence of local non-rigid transformations of organs caused by bending and stretching. The existing slice-to-volume registration (SVR)…

Accurately estimating and correcting the motion artifacts are crucial for 3D image reconstruction of the abdominal and in-utero magnetic resonance imaging (MRI). The state-of-art methods are based on slice-to-volume registration (SVR) where…

图像与视频处理 · 电气工程与系统科学 2019-08-29 Tong Zhang , Laurence H. Jackson , Alena Uus , James R. Clough , Lisa Story , Mary A. Rutherford , Joseph V. Hajnal , Maria Deprez

Multi-slice magnetic resonance images of the fetal brain are usually contaminated by severe and arbitrary fetal and maternal motion. Hence, stable and robust motion correction is necessary to reconstruct high-resolution 3D fetal brain…

图像与视频处理 · 电气工程与系统科学 2022-09-23 Wen Shi , Haoan Xu , Cong Sun , Jiwei Sun , Yamin Li , Xinyi Xu , Tianshu Zheng , Yi Zhang , Guangbin Wang , Dan Wu

Fetal brain MRI relies on rapid multi-view 2D slice acquisitions to reduce motion artifacts caused by fetal movement. However, these stacks are typically low resolution, may suffer from motion corruption, and do not adequately capture 3D…

计算机视觉与模式识别 · 计算机科学 2025-09-15 Ema Masterl , Tina Vipotnik Vesnaver , Žiga Špiclin

Reconstructing 3D fetal MR volumes from motion-corrupted stacks of 2D slices is a crucial and challenging task. Conventional slice-to-volume reconstruction (SVR) methods are time-consuming and require multiple orthogonal stacks for…

计算机视觉与模式识别 · 计算机科学 2026-04-13 Yinsong Wang , Thomas Fletcher , Xinzhe Luo , Aine Travers Dineen , Rhodri Cusack , Chen Qin

Rigid slice-to-volume registration is a challenging task, which finds application in medical imaging problems like image fusion for image guided surgeries and motion correction for volume reconstruction. It is usually formulated as an…

计算机视觉与模式识别 · 计算机科学 2016-08-22 Roque Porchetto , Franco Stramana , Nikos Paragios , Enzo Ferrante

This paper aims to solve a fundamental problem in intensity-based 2D/3D registration, which concerns the limited capture range and need for very good initialization of state-of-the-art image registration methods. We propose a regression…

计算机视觉与模式识别 · 计算机科学 2017-03-07 Benjamin Hou , Amir Alansary , Steven McDonagh , Alice Davidson , Mary Rutherford , Jo V. Hajnal , Daniel Rueckert , Ben Glocker , Bernhard Kainz

Advanced navigation techniques in image-guided interventions and surgical robotics require the rapid and precise alignment of 3D preoperative volumes (e.g., CT, MRI) to 2D intraoperative images (e.g., X-ray fluoroscopy). However, existing…

High-resolution fMRI provides a window into the brain's mesoscale organization. Yet, higher spatial resolution increases scan times, to compensate for the low signal and contrast-to-noise ratio. This work introduces a deep learning-based 3D…

图像与视频处理 · 电气工程与系统科学 2024-03-20 Hongwei Bran Li , Matthew S. Rosen , Shahin Nasr , Juan Eugenio Iglesias

Functional MRI (fMRI) is commonly used for interpreting neural activities across the brain. Numerous accelerated fMRI techniques aim to provide improved spatiotemporal resolutions. Among these, simultaneous multi-slice (SMS) imaging has…

Recovering high-fidelity 3D images from sparse or degraded 2D images is a fundamental challenge in medical imaging, with broad applications ranging from 3D ultrasound reconstruction to MRI super-resolution. In the context of fetal MRI,…

计算机视觉与模式识别 · 计算机科学 2025-12-17 Maik Dannecker , Steven Jia , Nil Stolt-Ansó , Nadine Girard , Guillaume Auzias , François Rousseau , Daniel Rueckert

This paper provides a comprehensive review of the latest advancements in fetal motion correction in MRI. We delve into various contemporary methodologies and technological advancements aimed at overcoming these challenges. It includes…

图像与视频处理 · 电气工程与系统科学 2024-01-31 Haoran Zhang , Yun Wang

Neuroanatomical segmentation in magnetic resonance imaging (MRI) of the brain is a prerequisite for volume, thickness and shape measurements. This work introduces a new highly accurate and versatile method based on 3D convolutional neural…

定量方法 · 定量生物学 2019-02-07 Philip Novosad , Vladimir Fonov , D. Louis Collins

We present a novel approach to variational volume reconstruction from sparse, noisy slice data using the Deep Ritz method. Motivated by biomedical imaging applications such as MRI-based slice-to-volume reconstruction (SVR), our approach…

图像与视频处理 · 电气工程与系统科学 2025-08-13 Conor Rowan , Sumedh Soman , John A. Evans
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