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Reliable and interpretable decision-making is essential in medical imaging, where diagnostic outcomes directly influence patient care. Despite advances in deep learning, most medical AI systems operate as opaque black boxes, providing…

计算机视觉与模式识别 · 计算机科学 2026-04-16 Pirzada Suhail , Aditya Anand , Amit Sethi

Latent variable models such as the Variational Auto-Encoder (VAE) have become a go-to tool for analyzing biological data, especially in the field of single-cell genomics. One remaining challenge is the interpretability of latent variables…

基因组学 · 定量生物学 2023-02-20 Romain Lopez , Nataša Tagasovska , Stephen Ra , Kyunghyn Cho , Jonathan K. Pritchard , Aviv Regev

Deep learning-based melanoma classification with dermoscopic images has recently shown great potential in automatic early-stage melanoma diagnosis. However, limited by the significant data imbalance and obvious extraneous artifacts, i.e.,…

图像与视频处理 · 电气工程与系统科学 2022-07-18 ChengHui Yu , MingKang Tang , ShengGe Yang , MingQing Wang , Zhe Xu , JiangPeng Yan , HanMo Chen , Yu Yang , Xiao-Jun Zeng , Xiu Li

The optimal design of compounds through manipulating properties at the molecular level is often the key to considerable scientific advances and improved process systems performance. This paper highlights key trends, challenges, and…

生物大分子 · 定量生物学 2020-07-13 Abdulelah S. Alshehri , Rafiqul Gani , Fengqi You

Cell classification and counting in immunohistochemical cytoplasm staining images play a pivotal role in cancer diagnosis. Weakly supervised learning is a potential method to deal with labor-intensive labeling. However, the inconstant cell…

图像与视频处理 · 电气工程与系统科学 2022-03-01 Shichuan Zhang , Chenglu Zhu , Honglin Li , Jiatong Cai , Lin Yang

Modeling the 3D structures of cells and tissues is crucial in biology. Sequential cross-sectional images from electron microscopy provide high-resolution intracellular structure information. The segmentation of complex cell structures…

定量方法 · 定量生物学 2025-02-14 Jin Kousaka , Atsuko H. Iwane , Yuichi Togashi

Deep learning has become an extremely effective tool for image classification and image restoration problems. Here, we apply deep learning to microscopy, and demonstrate how neural networks can exploit the chromatic dependence of the…

光学 · 物理学 2018-07-05 Eran Hershko* , Lucien E. Weiss* , Tomer Michaeli , Yoav Shechtman

An important line of research attempts to explain CNN image classifier predictions and intermediate layer representations in terms of human-understandable concepts. Previous work supports that deep representations are linearly separable…

计算机视觉与模式识别 · 计算机科学 2025-09-23 Alexandros Doumanoglou , Stylianos Asteriadis , Dimitrios Zarpalas

Monocular depth and pose estimation play an important role in the development of colonoscopy-assisted navigation, as they enable improved screening by reducing blind spots, minimizing the risk of missed or recurrent lesions, and lowering…

计算机视觉与模式识别 · 计算机科学 2026-02-23 Xinwei Ju , Rema Daher , Danail Stoyanov , Sophia Bano , Francisco Vasconcelos

This paper explores improvements to the masked image modeling (MIM) paradigm. The MIM paradigm enables the model to learn the main object features of the image by masking the input image and predicting the masked part by the unmasked part.…

计算机视觉与模式识别 · 计算机科学 2022-05-24 Jiawei Mao , Xuesong Yin , Yuanqi Chang , Honggu Zhou

A central goal in deep learning is to learn compact representations of features at every layer of a neural network, which is useful for both unsupervised representation learning and structured network pruning. While there is a growing body…

机器学习 · 计算机科学 2021-10-05 Jie Bu , Arka Daw , M. Maruf , Anuj Karpatne

Convolutional neural networks (CNNs) achieve prevailing results in segmentation tasks nowadays and represent the state-of-the-art for image-based analysis. However, the understanding of the accurate decision-making process of a CNN is…

图像与视频处理 · 电气工程与系统科学 2024-10-01 Tillmann Rheude , Andreas Wirtz , Arjan Kuijper , Stefan Wesarg

Visualizing CNN is an important part in building trust and explaining model's prediction. Methods like CAM and GradCAM have been really successful in localizing area of the image responsible for the output but are only limited to…

计算机视觉与模式识别 · 计算机科学 2024-02-07 Mudit Bachhawat

Deep learning models often function as black boxes, providing no straightforward reasoning for their predictions. This is particularly true for computer vision models, which process tensors of pixel values to generate outcomes in tasks such…

计算机视觉与模式识别 · 计算机科学 2024-10-02 Sachin Karmani , Thanushon Sivakaran , Gaurav Prasad , Mehmet Ali , Wenbo Yang , Sheyang Tang

Understanding internal representations of neural models is a core interest of mechanistic interpretability. Due to its large dimensionality, the representation space can encode various aspects about inputs. To what extent are different…

机器学习 · 计算机科学 2026-05-15 Xinting Huang , Michael Hahn

Single-beam scanning electron microscopes (SEM) are widely used to acquire massive data sets for biomedical study, material analysis, and fabrication inspection. Datasets are typically acquired with uniform acquisition: applying the…

图像与视频处理 · 电气工程与系统科学 2021-01-11 Lu Mi , Hao Wang , Yaron Meirovitch , Richard Schalek , Srinivas C. Turaga , Jeff W. Lichtman , Aravinthan D. T. Samuel , Nir Shavit

The need for a large amount of labeled data in the supervised setting has led recent studies to utilize self-supervised learning to pre-train deep neural networks using unlabeled data. Many self-supervised training strategies have been…

计算机视觉与模式识别 · 计算机科学 2022-04-06 Mojtaba Bahrami , Mahsa Ghorbani , Nassir Navab

We present SemiOccam, an image recognition network that leverages semi-supervised learning in a highly efficient manner. Existing works often rely on complex training techniques and architectures, requiring hundreds of GPU hours for…

计算机视觉与模式识别 · 计算机科学 2025-07-22 Rui Yann , Tianshuo Zhang , Xianglei Xing

Pathomics is a recent approach that offers rich quantitative features beyond what black-box deep learning can provide, supporting more reproducible and explainable biomarkers in digital pathology. However, many derived features (e.g.,…

计算机视觉与模式识别 · 计算机科学 2026-02-06 Yuechen Yang , Junlin Guo , Ruining Deng , Junchao Zhu , Zhengyi Lu , Chongyu Qu , Yanfan Zhu , Xingyi Guo , Yu Wang , Shilin Zhao , Haichun Yang , Yuankai Huo

Most of the approaches for discovering visual attributes in images demand significant supervision, which is cumbersome to obtain. In this paper, we aim to discover visual attributes in a weakly supervised setting that is commonly…

计算机视觉与模式识别 · 计算机科学 2015-04-21 Sukrit Shankar , Vikas K. Garg , Roberto Cipolla
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