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Graph Transformers have recently attracted attention for molecular property prediction by combining the inductive biases of graph neural networks (GNNs) with the global receptive field of Transformers. However, many existing hybrid…

机器学习 · 计算机科学 2026-04-09 Yi Yang , Ovidiu Daescu

In many important graph data processing applications the acquired information includes both node features and observations of the graph topology. Graph neural networks (GNNs) are designed to exploit both sources of evidence but they do not…

机器学习 · 计算机科学 2021-10-28 Eli Chien , Jianhao Peng , Pan Li , Olgica Milenkovic

Graph kernels are historically the most widely-used technique for graph classification tasks. However, these methods suffer from limited performance because of the hand-crafted combinatorial features of graphs. In recent years, graph neural…

机器学习 · 计算机科学 2022-02-28 Aosong Feng , Chenyu You , Shiqiang Wang , Leandros Tassiulas

Recently, there has been great success in applying deep neural networks on graph structured data. Most work, however, focuses on either node- or graph-level supervised learning, such as node, link or graph classification or node-level…

机器学习 · 计算机科学 2021-12-15 Robin Winter , Frank Noé , Djork-Arné Clevert

We examine two fundamental tasks associated with graph representation learning: link prediction and semi-supervised node classification. We present a novel autoencoder architecture capable of learning a joint representation of both local…

机器学习 · 计算机科学 2019-03-12 Phi Vu Tran

This paper studies learning the representations of whole graphs in both unsupervised and semi-supervised scenarios. Graph-level representations are critical in a variety of real-world applications such as predicting the properties of…

机器学习 · 计算机科学 2020-01-20 Fan-Yun Sun , Jordan Hoffmann , Vikas Verma , Jian Tang

Graph-based clustering has shown promising performance in many tasks. A key step of graph-based approach is the similarity graph construction. In general, learning graph in kernel space can enhance clustering accuracy due to the…

机器学习 · 计算机科学 2019-05-22 Zhao Kang , Honghui Xu , Boyu Wang , Hongyuan Zhu , Zenglin Xu

Graph representation learning has become a hot research topic due to its powerful nonlinear fitting capability in extracting representative node embeddings. However, for sequential data such as speech signals, most traditional methods…

声音 · 计算机科学 2024-05-08 Yingxue Gao , Huan Zhao , Zixing Zhang

Inspired by the recent success of self-supervised methods applied on images, self-supervised learning on graph structured data has seen rapid growth especially centered on augmentation-based contrastive methods. However, we argue that…

机器学习 · 计算机科学 2021-12-08 Namkyeong Lee , Junseok Lee , Chanyoung Park

The prevailing approach to embedding prior knowledge within convolutional layers typically includes the design of steerable kernels or their modulation using designated kernel banks. In this study, we introduce the Analytic Convolutional…

机器学习 · 计算机科学 2024-07-09 Jingmao Cui , Donglai Tao , Linmi Tao , Ruiyang Liu , Yu Cheng

This work presents a novel approach to tabular data prediction leveraging graph structure learning and graph neural networks. Despite the prevalence of tabular data in real-world applications, traditional deep learning methods often…

机器学习 · 计算机科学 2023-05-26 Jay Chiehen Liao , Cheng-Te Li

This paper presents a methodology for image classification using Graph Neural Network (GNN) models. We transform the input images into region adjacency graphs (RAGs), in which regions are superpixels and edges connect neighboring…

Multi-kernel learning (MKL) has been widely used in function approximation tasks. The key problem of MKL is to combine kernels in a prescribed dictionary. Inclusion of irrelevant kernels in the dictionary can deteriorate accuracy of MKL,…

机器学习 · 计算机科学 2021-02-10 Pouya M Ghari , Yanning Shen

Convolution on 3D point clouds that generalized from 2D grid-like domains is widely researched yet far from perfect. The standard convolution characterises feature correspondences indistinguishably among 3D points, presenting an intrinsic…

计算机视觉与模式识别 · 计算机科学 2021-08-20 Haoran Zhou , Yidan Feng , Mingsheng Fang , Mingqiang Wei , Jing Qin , Tong Lu

Graph Neural Networks (GNNs) have been widely employed for feature representation learning in molecular graphs. Therefore, it is crucial to enhance the expressiveness of feature representation to ensure the effectiveness of GNNs. However, a…

机器学习 · 计算机科学 2024-09-16 Chengyu Yao , Hong Huang , Hang Gao , Fengge Wu , Haiming Chen , Junsuo Zhao

Nonnegative Matrix Factorization (NMF) has been continuously evolving in several areas like pattern recognition and information retrieval methods. It factorizes a matrix into a product of 2 low-rank non-negative matrices that will define…

机器学习 · 计算机科学 2013-04-04 Jing-Yan Wang , Mustafa AbdulJabbar

Despite the remarkable accomplishments of graph neural networks (GNNs), they typically rely on task-specific labels, posing potential challenges in terms of their acquisition. Existing work have been made to address this issue through the…

机器学习 · 计算机科学 2023-12-22 Siyang Luo , Ziyi Jiang , Zhenghan Chen , Xiaoxuan Liang

Constructing appropriate representations of molecules lies at the core of numerous tasks such as material science, chemistry and drug designs. Recent researches abstract molecules as attributed graphs and employ graph neural networks (GNN)…

机器学习 · 计算机科学 2021-07-29 Jianwen Chen , Shuangjia Zheng , Ying Song , Jiahua Rao , Yuedong Yang

For semi-supervised learning on graphs, we study how initial kernels in a supervised learning regime can be augmented with additional information from known priors or from unsupervised learning outputs. These augmented kernels are…

机器学习 · 计算机科学 2020-03-18 Wolfgang Erb

Contrastive learning has emerged as a premier method for learning representations with or without supervision. Recent studies have shown its utility in graph representation learning for pre-training. Despite successes, the understanding of…

机器学习 · 计算机科学 2023-02-07 Amur Ghose , Yingxue Zhang , Jianye Hao , Mark Coates