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Recent advances in large language models (LLMs) have unlocked powerful reasoning and decision-making capabilities. However, their inherent dependence on static parametric memory fundamentally limits their adaptability, factual accuracy, and…

信息检索 · 计算机科学 2025-08-07 Xinkui Zhao , Haode Li , Yifan Zhang , Guanjie Cheng , Yueshen Xu

The generation of drug-like molecules is crucial for drug design. Existing reinforcement learning (RL) methods often overlook structural information. However, feature engineering-based methods usually merely focus on binding affinity…

机器学习 · 计算机科学 2024-11-25 Xiangyu Zhang

We introduce a novel graph-based Retrieval-Augmented Generation (RAG) framework specifically designed for the medical domain, called \textbf{MedGraphRAG}, aimed at enhancing Large Language Model (LLM) capabilities for generating…

计算机视觉与模式识别 · 计算机科学 2024-10-17 Junde Wu , Jiayuan Zhu , Yunli Qi , Jingkun Chen , Min Xu , Filippo Menolascina , Vicente Grau

Ensuring factual accuracy while maintaining the creative capabilities of Large Language Model Agents (LMAs) poses significant challenges in the development of intelligent agent systems. LMAs face prevalent issues such as information…

人工智能 · 计算机科学 2024-05-21 Diego Sanmartin

Large Language Models (LLMs) have greatly contributed to the development of adaptive intelligent agents and are positioned as an important way to achieve Artificial General Intelligence (AGI). However, LLMs are prone to produce factually…

计算与语言 · 计算机科学 2024-08-29 Weijian Xie , Xuefeng Liang , Yuhui Liu , Kaihua Ni , Hong Cheng , Zetian Hu

Fragment-based drug discovery, in which molecular fragments are assembled into new molecules with desirable biochemical properties, has achieved great success. However, many fragment-based molecule generation methods show limited…

Knowledge Graph (KG) generation requires models to learn complex semantic dependencies between triples while maintaining domain validity constraints. Unlike link prediction, which scores triples independently, generative models must capture…

人工智能 · 计算机科学 2026-02-09 Thiviyan Thanapalasingam , Antonis Vozikis , Peter Bloem , Paul Groth

Despite initial successes and a variety of architectures, retrieval-augmented generation systems still struggle to reliably retrieve and connect the multi-step evidence required for complicated reasoning tasks. Most of the standard RAG…

人工智能 · 计算机科学 2026-05-26 Jovan Pavlović , Miklós Krész , László Hajdu

Drug Discovery is a fundamental and ever-evolving field of research. The design of new candidate molecules requires large amounts of time and money, and computational methods are being increasingly employed to cut these costs. Machine…

机器学习 · 统计学 2021-05-28 Pietro Bongini , Monica Bianchini , Franco Scarselli

Knowledge graphs and large language models (LLMs) are key tools for biomedical knowledge integration and reasoning, facilitating structured organization of scientific articles and discovery of complex semantic relationships. However,…

计算与语言 · 计算机科学 2025-04-01 Yichun Feng , Jiawei Wang , Ruikun He , Lu Zhou , Yixue Li

Artificial intelligence (AI) is reshaping modern healthcare by advancing disease diagnosis, treatment decision-making, and biomedical research. Among AI technologies, large language models (LLMs) have become especially impactful, enabling…

人工智能 · 计算机科学 2025-11-18 Zhengda Wang , Daqian Shi , Jingyi Zhao , Xiaolei Diao , Xiongfeng Tang , Yanguo Qin

Large language models (LLMs) have made significant progress in general-purpose natural language processing tasks. However, LLMs are still facing challenges when applied to domain-specific areas like telecommunications, which demands…

计算与语言 · 计算机科学 2025-05-22 Dun Yuan , Hao Zhou , Di Wu , Xue Liu , Hao Chen , Yan Xin , Jianzhong , Zhang

Retrieval-augmented generation (RAG) has emerged as a promising technology for addressing hallucination issues in the responses generated by large language models (LLMs). Existing studies on RAG primarily focus on applying semantic-based…

计算与语言 · 计算机科学 2025-02-12 Xiangrong Zhu , Yuexiang Xie , Yi Liu , Yaliang Li , Wei Hu

Retrieval-Augmented Generation (RAG) based on knowledge graphs (KGs) enhances large language models (LLMs) by providing structured and interpretable external knowledge. However, existing KG-based RAG methods struggle to retrieve accurate…

人工智能 · 计算机科学 2025-10-21 Junchi Yu , Yujie Liu , Jindong Gu , Philip Torr , Dongzhan Zhou

Large language models (LLMs) have demonstrated remarkable capabilities in a wide range of tasks, yet their application to specialized domains remains challenging due to the need for deep expertise. Retrieval-Augmented generation (RAG) has…

Graph-based Retrieval-Augmented Generation (RAG) methods have significantly enhanced the performance of large language models (LLMs) in domain-specific tasks. However, existing RAG methods do not adequately utilize the naturally inherent…

计算与语言 · 计算机科学 2025-09-29 Haoyu Huang , Yongfeng Huang , Junjie Yang , Zhenyu Pan , Yongqiang Chen , Kaili Ma , Hongzhi Chen , James Cheng

Retrieval-Augmented Generation (RAG) plays a crucial role in grounding Large Language Models by leveraging external knowledge, whereas the effectiveness is often compromised by the retrieval of contextually flawed or incomplete information.…

人工智能 · 计算机科学 2025-11-13 Yaoze Zhang , Rong Wu , Pinlong Cai , Xiaoman Wang , Guohang Yan , Song Mao , Ding Wang , Botian Shi

Knowledge graphs (KGs) serve as powerful tools for organizing and representing structured knowledge. While their utility is widely recognized, challenges persist in their automation and completeness. Despite efforts in automation and the…

人工智能 · 计算机科学 2024-05-07 Mutahira Khalid , Raihana Rahman , Asim Abbas , Sushama Kumari , Iram Wajahat , Syed Ahmad Chan Bukhari

Retrieval augmented generation (RAG) has shown great power in improving Large Language Models (LLMs). However, most existing RAG-based LLMs are dedicated to retrieving single modality information, mainly text; while for many real-world…

计算与语言 · 计算机科学 2025-06-09 Saptarshi Sengupta , Shuhua Yang , Paul Kwong Yu , Fali Wang , Suhang Wang

Traditional drug discovery programs are being transformed by the advent of machine learning methods. Among these, Generative AI methods (GM) have gained attention due to their ability to design new molecules and enhance specific properties…