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相关论文: Graph Transformers without Positional Encodings

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Do autoregressive Transformer language models require explicit positional encodings (PEs)? The answer is 'no' provided they have more than one layer -- they can distinguish sequences with permuted tokens without the need for explicit PEs.…

机器学习 · 计算机科学 2025-06-03 Kazuki Irie

Graph Neural Networks (GNNs) have shown promising potential in graph representation learning. The majority of GNNs define a local message-passing mechanism, propagating information over the graph by stacking multiple layers. These methods,…

机器学习 · 计算机科学 2024-02-20 Ali Behrouz , Farnoosh Hashemi

Graph Representation Learning (GRL) is an influential methodology, enabling a more profound understanding of graph-structured data and aiding graph clustering, a critical task across various domains. The recent incursion of attention…

机器学习 · 计算机科学 2023-08-15 Shuo Han , Jiacheng Liu , Jiayun Wu , Yinan Chen , Li Tao

Graph Transformers (GTs) have recently demonstrated remarkable performance across diverse domains. By leveraging attention mechanisms, GTs are capable of modeling long-range dependencies and complex structural relationships beyond local…

机器学习 · 计算机科学 2025-06-06 Jiachen Tang , Zhonghao Wang , Sirui Chen , Sheng Zhou , Jiawei Chen , Jiajun Bu

As transformers are equivariant to the permutation of input tokens, encoding the positional information of tokens is necessary for many tasks. However, since existing positional encoding schemes have been initially designed for NLP tasks,…

计算机视觉与模式识别 · 计算机科学 2024-06-10 Takeru Miyato , Bernhard Jaeger , Max Welling , Andreas Geiger

Graph Transformers excel in long-range dependency modeling, but generally require quadratic memory complexity in the number of nodes in an input graph, and hence have trouble scaling to large graphs. Sparse attention variants such as…

机器学习 · 计算机科学 2024-11-26 Hamed Shirzad , Honghao Lin , Balaji Venkatachalam , Ameya Velingker , David Woodruff , Danica Sutherland

By incorporating the graph structural information into Transformers, graph Transformers have exhibited promising performance for graph representation learning in recent years. Existing graph Transformers leverage specific strategies, such…

机器学习 · 计算机科学 2022-11-16 Gaichao Li , Jinsong Chen , Kun He

Existing studies have shown that Message-Passing Graph Neural Networks (MPNNs) are highly susceptible to adversarial attacks. In contrast, despite the increasing importance of Graph Transformers (GTs), their robustness properties are…

机器学习 · 计算机科学 2026-04-14 Philipp Foth , Lukas Gosch , Simon Geisler , Leo Schwinn , Stephan Günnemann

Graph Neural Networks (GNNs) have been widely applied to various fields due to their powerful representations of graph-structured data. Despite the success of GNNs, most existing GNNs are designed to learn node representations on the fixed…

机器学习 · 计算机科学 2021-06-14 Seongjun Yun , Minbyul Jeong , Sungdong Yoo , Seunghun Lee , Sean S. Yi , Raehyun Kim , Jaewoo Kang , Hyunwoo J. Kim

Graph Transformers (GTs) have demonstrated a strong capability in modeling graph structures by addressing the intrinsic limitations of graph neural networks (GNNs), such as over-smoothing and over-squashing. Recent studies have proposed…

Graph neural networks (GNNs) have been widely adopted in engineering applications such as social network analysis, chemical research and computer vision. However, their efficacy is severely compromised by the inherent homophily assumption,…

机器学习 · 计算机科学 2026-04-13 Yi Luo , Xu Sun , Guangchun Luo , Aiguo Chen

Recent advancements in large-scale pre-training have shown the potential to learn generalizable representations for downstream tasks. In the graph domain, however, capturing and transferring structural information across different graph…

机器学习 · 计算机科学 2026-02-24 Jialin Chen , Haolan Zuo , Haoyu Peter Wang , Siqi Miao , Pan Li , Rex Ying

Transformers have achieved remarkable success in time series modeling, yet their internal mechanisms remain opaque. This work demystifies the Transformer encoder by establishing its fundamental equivalence to a Graph Convolutional Network…

机器学习 · 计算机科学 2025-10-21 Chen Zhang , Weixin Bu , Wendong Xu , Runsheng Yu , Yik-Chung Wu , Ngai Wong

Graph Neural Networks (GNNs) have shown impressive performance in graph representation learning, but they face challenges in capturing long-range dependencies due to their limited expressive power. To address this, Graph Transformers (GTs)…

The emerging graph Transformers have achieved impressive performance for graph representation learning over graph neural networks (GNNs). In this work, we regard the self-attention mechanism, the core module of graph Transformers, as a…

机器学习 · 计算机科学 2023-10-18 Jinsong Chen , Gaichao Li , John E. Hopcroft , Kun He

Graph neural networks based on iterative one-hop message passing have been shown to struggle in harnessing the information from distant nodes effectively. Conversely, graph transformers allow each node to attend to all other nodes directly,…

机器学习 · 计算机科学 2024-06-06 Yuhui Ding , Antonio Orvieto , Bobby He , Thomas Hofmann

Signed Graph Neural Networks (SGNNs) have been shown to be effective in analyzing complex patterns in real-world situations where positive and negative links coexist. However, SGNN models suffer from poor explainability, which limit their…

机器学习 · 计算机科学 2024-12-13 Lu Li , Jiale Liu , Xingyu Ji , Maojun Wang , Zeyu Zhang

Graph neural networks (GNN) have shown great advantages in many graph-based learning tasks but often fail to predict accurately for a task-based on sets of nodes such as link/motif prediction and so on. Many works have recently proposed to…

机器学习 · 计算机科学 2022-06-24 Haorui Wang , Haoteng Yin , Muhan Zhang , Pan Li

Graph Transformers (GTs) have significantly advanced the field of graph representation learning by overcoming the limitations of message-passing graph neural networks (GNNs) and demonstrating promising performance and expressive power.…

机器学习 · 计算机科学 2024-05-07 Wenhao Zhu , Guojie Song , Liang Wang , Shaoguo Liu

Graph transformer has been proven as an effective graph learning method for its adoption of attention mechanism that is capable of capturing expressive representations from complex topological and feature information of graphs. Graph…

机器学习 · 计算机科学 2024-03-26 Dongqi Fu , Zhigang Hua , Yan Xie , Jin Fang , Si Zhang , Kaan Sancak , Hao Wu , Andrey Malevich , Jingrui He , Bo Long