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After injury, if regeneration can be observed in hydra, planaria and some vertebrates, regeneration is rare in mammals and particularly in humans. In this paper, we investigate the mechanisms by which biological tissues recover after…

Disordered systems subject to a fluctuating environment can self-organize into a complex history-dependent response, retaining a memory of the driving. In sheared amorphous solids, self-organization is established by the emergence of a…

软凝聚态物质 · 物理学 2026-01-08 Muhittin Mungan , Eric Clement , Damien Vandembroucq , Srikanth Sastry

Adult neurogenesis has long been documented in the vertebrate brain, and recently even in humans. Although it has been conjectured for many years that its functional role is related to the renewing of memories, no clear mechanism as to how…

无序系统与神经网络 · 物理学 2007-05-23 Guillermo A. Cecchi , Leopoldo T. Petreanu , Arturo Alvarez-Buylla , Marcelo O. Magnasco

We use linear stability analysis to show that an isotropic phase of elongated particles with dipolar flow fields can develop nematic order as a result of their activity. We argue that ordering is favoured if the particles are flow-aligning…

软凝聚态物质 · 物理学 2020-03-18 Sreejith Santhosh , Mehrana R. Nejad , Amin Doostmohammadi , Julia M. Yeomans , Sumesh P. Thampi

We present a framework to take new measurements in nematic systems that contain active elements such as molecular motors. Spatio-temporal fields of stress, traction, velocity, pressure, and forces are estimated jointly from microscopy…

软凝聚态物质 · 物理学 2024-12-02 Aleix Boquet-Pujadas , Jérôme Hardouïn , Junhao Wen , Jordi Ignés-Mullol , Francesc Sagués

Adaptive response to a varying environment is a common feature of biological organisms. Reproducing such features in electronic systems and circuits is of great importance for a variety of applications. Here, we consider memory models…

细胞行为 · 定量生物学 2013-10-29 Fabio Lorenzo Traversa , Yuriy V. Pershin , Massimiliano Di Ventra

Sleep is essential for learning and cognition, but the mechanisms by which it stabilizes learning, supports creativity, and manages the energy consumption of networks engaged in post-sleep task have not been yet modelled. During sleep, the…

Alignment interactions in active matter are typically modeled as relaxational dynamics toward local consensus. In unbounded systems, this makes alignment effectively decoupled from local density and therefore unable to sustain self-confined…

软凝聚态物质 · 物理学 2026-04-10 Julian Giraldo-Barreto , Viktor Holubec

Despite substantial research into the biological basis of memory, the precise mechanisms by which experiences are encoded, stored, and retrieved in the brain remain incompletely understood. A growing body of evidence supports the engram…

神经与进化计算 · 计算机科学 2025-10-28 Daniel Szelogowski

The study of liquid crystals at equilibrium has led to fundamental insights into the nature of ordered materials, as well as to practical applications such as display technologies. Active nematics are a fundamentally different class of…

软凝聚态物质 · 物理学 2015-08-19 Stephen J. DeCamp , Gabriel S. Redner , Aparna Baskaran , Michael F. Hagan , Zvonimir Dogic

Reinforcement Learning faces an important challenge in partial observable environments that has long-term dependencies. In order to learn in an ambiguous environment, an agent has to keep previous perceptions in a memory. Earlier memory…

机器学习 · 计算机科学 2023-02-22 Alper Demir

Thanks to recent technological advances, it is now possible to track with an unprecedented precision and for long periods of time the movement patterns of many living organisms in their habitat. The increasing amount of data available on…

种群与进化 · 定量生物学 2015-05-19 Denis Boyer , Peter D. Walsh

In varying environments it is beneficial for organisms to utilize available cues to infer the conditions they may encounter and express potentially favorable traits. However, external cues can be unreliable or too costly to use. We consider…

种群与进化 · 定量生物学 2023-01-10 Leo Law , BingKan Xue

Soft composite solids, comprising discrete inclusions embedded within a compliant matrix, are emerging candidates for engineering synthetic tissues and soft robotic materials. Current strategies for controlling their nonlinear mechanics,…

软凝聚态物质 · 物理学 2026-04-23 Yiqiu Zhao , Deng Pan , Yiming Pang , Jonathan Barés , Chang Xu , Che Liu , Haitao Hu , Yuliang Jin , Qin Xu

Neural circuits are able to perform computations under very diverse conditions and requirements. The required computations impose clear constraints on their fine-tuning: a rapid and maximally informative response to stimuli in general…

We show that a suspension of non-interacting deformable particles subjected to an oscillatory shear flow leads to development of nematic order that arises from the phenomenon of phase synchronization. The synchronized state corresponds to a…

软凝聚态物质 · 物理学 2025-07-10 Ioannis Hadjifrangiskou , Sumesh P. Thampi , Rahil N. Valani

We investigate dynamics of an optomechanical system under the Non-Markovian environment. In the weak optomechanical single-photon coupling regime, we provide an analytical approach fully taking into account the non-Markovian memory effects.…

量子物理 · 物理学 2016-04-12 Jiong Cheng , Wen-Zhao Zhang , Ling Zhou , Weiping Zhang

The brain's diversity of neurons enables a rich behavioral repertoire and flexible adaptation to new situations. Assuming that the ecological pressure has optimized this neuronal variety, we propose exploiting na\"ive behavior to map the…

神经元与认知 · 定量生物学 2023-05-01 Kevin Luxem , David Eriksson

It was suggested that the two consecutive metamagnetic transitions and the large residual resistivity discovered in Sr$_3$Ru$_2$O$_7$ can be understood via the nematic order and its domains in a single layer system. However, a recently…

强关联电子 · 物理学 2009-11-13 Christoph Puetter , Hyeonjin Doh , Hae-Young Kee

Active nematic fluids confined in narrow channels generate spontaneous flows when the activity is sufficiently intense. Recently, it was shown that if the molecular anchoring at the channel walls is conflicting flows are initiated even in…

软凝聚态物质 · 物理学 2021-11-02 C. Rorai , F. Toschi , I. Pagonabarraga
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