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We present a new instance segmentation approach tailored to biological images, where instances may correspond to individual cells, organisms or plant parts. Unlike instance segmentation for user photographs or road scenes, in biological…

计算机视觉与模式识别 · 计算机科学 2020-04-24 Victor Kulikov , Victor Lempitsky

Many recent medical segmentation systems rely on powerful deep learning models to solve highly specific tasks. To maximize performance, it is standard practice to evaluate numerous pipelines with varying model topologies, optimization…

机器学习 · 计算机科学 2019-11-06 Mathias Perslev , Erik Bjørnager Dam , Akshay Pai , Christian Igel

Brain vessel image segmentation can be used as a promising biomarker for better prevention and treatment of different diseases. One successful approach is to consider the segmentation as an image-to-image translation task and perform a…

图像与视频处理 · 电气工程与系统科学 2022-10-28 Bin Xie , Hao Tang , Bin Duan , Dawen Cai , Yan Yan

Masked image modeling (MIM) with transformer backbones has recently been exploited as a powerful self-supervised pre-training technique. The existing MIM methods adopt the strategy to mask random patches of the image and reconstruct the…

计算机视觉与模式识别 · 计算机科学 2024-02-05 Zhaohu Xing , Lei Zhu , Lequan Yu , Zhiheng Xing , Liang Wan

In the effort to aid cytologic diagnostics by establishing automatic single cell screening using high throughput digital holographic microscopy for clinical studies thousands of images and millions of cells are captured. The bottleneck lies…

图像与视频处理 · 电气工程与系统科学 2024-10-28 Julia Sistermanns , Ellen Emken , Gregor Weirich , Oliver Hayden , Wolfgang Utschick

Precise analysis of nanoparticles for characterization in electron microscopy images is essential for advancing nanomaterial development. Yet it remains challenging due to the time-consuming nature of manual methods and the shortcomings of…

计算机视觉与模式识别 · 计算机科学 2026-04-07 Anindya Pal , Varun Ajith , Saumik Bhattacharya , Sayantari Ghosh

Most publicly available medical segmentation datasets are only partially labeled, with annotations provided for a subset of anatomical structures. When multiple datasets are combined for training, this incomplete annotation poses…

计算机视觉与模式识别 · 计算机科学 2025-05-28 Jiong Wu , Yang Xing , Boxiao Yu , Wei Shao , Kuang Gong

Tissue segmentation is the mainstay of pathological examination, whereas the manual delineation is unduly burdensome. To assist this time-consuming and subjective manual step, researchers have devised methods to automatically segment…

图像与视频处理 · 电气工程与系统科学 2022-08-08 Yang Nan , Peng Tang , Guyue Zhang , Caihong Zeng , Zhihong Liu , Zhifan Gao , Heye Zhang , Guang Yang

We propose a deep clustering architecture alongside image segmentation for medical image analysis. The main idea is based on unsupervised learning to cluster images on severity of the disease in the subject's sample, and this image is then…

图像与视频处理 · 电气工程与系统科学 2020-05-28 Sharmin Pathan , Anant Tripathi

We developed a new joint probabilistic segmentation and image distribution matching generative adversarial network (PSIGAN) for unsupervised domain adaptation (UDA) and multi-organ segmentation from magnetic resonance (MRI) images. Our UDA…

图像与视频处理 · 电气工程与系统科学 2021-07-20 Jue Jiang , Yu Chi Hu , Neelam Tyagi , Andreas Rimner , Nancy Lee , Joseph O. Deasy , Sean Berry , Harini Veeraraghavan

This paper proposes a novel self-supervised based Cut-and-Paste GAN to perform foreground object segmentation and generate realistic composite images without manual annotations. We accomplish this goal by a simple yet effective…

计算机视觉与模式识别 · 计算机科学 2023-04-06 Kunal Chaturvedi , Ali Braytee , Jun Li , Mukesh Prasad

High-performance visual recognition systems generally require a large collection of labeled images to train. The expensive data curation can be an obstacle for improving recognition performance. Sharing more data allows training for better…

计算机视觉与模式识别 · 计算机科学 2019-06-24 Tae-hoon Kim , Dongmin Kang , Kari Pulli , Jonghyun Choi

Direct automatic segmentation of objects from 3D medical imaging, such as magnetic resonance (MR) imaging, is challenging as it often involves accurately identifying a number of individual objects with complex geometries within a large…

图像与视频处理 · 电气工程与系统科学 2021-09-23 Wei Dai , Boyeong Woo , Siyu Liu , Matthew Marques , Craig B. Engstrom , Peter B. Greer , Stuart Crozier , Jason A. Dowling , Shekhar S. Chandra

Quantitative cancer image analysis relies on the accurate delineation of tumours, a very specialised and time-consuming task. For this reason, methods for automated segmentation of tumours in medical imaging have been extensively developed…

图像与视频处理 · 电气工程与系统科学 2022-12-07 Saúl Alonso-Monsalve , Leigh H. Whitehead , Adam Aurisano , Lorena Escudero Sanchez

Within this thesis we propose a platform for combining Augmented Reality (AR) hardware with machine learning in a user-oriented pipeline, offering to the medical staff an intuitive 3D visualization of volumetric Computed Tomography (CT) and…

计算机视觉与模式识别 · 计算机科学 2018-08-16 Lucian Trestioreanu

This paper presents a comprehensive evaluation framework for image segmentation algorithms, encompassing naive methods, machine learning approaches, and deep learning techniques. We begin by introducing the fundamental concepts and…

计算机视觉与模式识别 · 计算机科学 2025-04-08 Tatiana Merkulova , Bharani Jayakumar

Originated from distributed learning, federated learning enables privacy-preserved collaboration on a new abstracted level by sharing the model parameters only. While the current research mainly focuses on optimizing learning algorithms and…

机器学习 · 计算机科学 2020-09-17 Cong Wang , Yuanyuan Yang , Pengzhan Zhou

Deep learning models, such as the fully convolutional network (FCN), have been widely used in 3D biomedical segmentation and achieved state-of-the-art performance. Multiple modalities are often used for disease diagnosis and quantification.…

图像与视频处理 · 电气工程与系统科学 2019-08-23 Yu Chen , Jiawei Chen , Dong Wei , Yuexiang Li , Yefeng Zheng

In this contribution, a semi-automatic segmentation algorithm for (medical) image analysis is presented. More precise, the approach belongs to the category of interactive contouring algorithms, which provide real-time feedback of the…

计算机视觉与模式识别 · 计算机科学 2014-06-10 Jan Egger

Recently deep neural networks, which require a large amount of annotated samples, have been widely applied in nuclei instance segmentation of H\&E stained pathology images. However, it is inefficient and unnecessary to label all pixels for…

计算机视觉与模式识别 · 计算机科学 2022-12-21 Wei Lou , Haofeng Li , Guanbin Li , Xiaoguang Han , Xiang Wan