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Understanding phononic heat transport processes in molecular junctions is a central issue in the developing field of nanoscale heat conduction and manipulation. Here we present a Stochastic Nonequlibrium Molecular Dynamics simulation…

材料科学 · 物理学 2021-02-04 Inon Sharony , Renai Chen , Abraham Nitzan

Nonequilibrium molecular dynamics (NEMD) has been extensively used to study thermal transport at various length scales in many materials. In this method, two local thermostats at different temperatures are used to generate a nonequilibrium…

介观与纳米尺度物理 · 物理学 2020-01-08 Zhen Li , Shiyun Xiong , Charles Sievers , Yue Hu , Zheyong Fan , Ning Wei , Hua Bao , Shunda Chen , Davide Donadio , Tapio Ala-Nissila

With the objective to understand microscopic principles governing thermal energy flow in nanojunctions, we study phononic heat transport through metal-molecule-metal junctions using classical molecular dynamics (MD) simulations. Considering…

介观与纳米尺度物理 · 物理学 2022-11-23 Jonathan J. Wang , Jie Gong , Alan J. H. McGaughey , Dvira Segal

We investigate the motion of a colloidal particle driven out of equilibrium by an external torque. We use the molecular dynamics simulation that is alternative to the numerical integration approach based on the Langevin equation and is…

统计力学 · 物理学 2017-03-08 Donghwan Yoo , Youngkyun Jung , Chulan Kwon

Thermal transport through nanosystems is central to numerous processes in chemistry, material sciences, electrical and mechanical engineering, with classical molecular dynamics as the key simulation tool. Here we focus on thermal junctions…

介观与纳米尺度物理 · 物理学 2020-08-31 Na'im Kalantar , Bijay Kumar Agarwalla , Dvira Segal

Thermal conductance of single molecular junctions at room temperature has been measured recently using picowatt-resolution scanning probes. However, fully understanding thermal transport in a much wider temperature range is needed for the…

介观与纳米尺度物理 · 物理学 2022-02-15 Gen Li , Bing-Zhong Hu , Nuo Yang , Jing-Tao Lü

In this work we investigate the transient solidification of a Lennard-Jones liquid using non-equilibrium molecular dynamics simulations and continuum heat transfer theory. The simulations are performed in slab-shaped boxes, where a cold…

介观与纳米尺度物理 · 物理学 2020-10-26 Francesc Font , William Micou , Fernando Bresme

This work concerns the theoretical description of the quantum dynamics of molecular junctions with thermal fluctuations and probability losses To this end, we propose a theory for describing non-Hermitian quantum systems embedded in…

量子物理 · 物理学 2021-02-24 Andrea Grimaldi , Alessandro Sergi , Antonino Messina

We study the heat transfer between two nanoparticles held at different temperatures that interact through nonreciprocal forces, by combining molecular dynamics simulations with stochastic thermodynamics. Our simulations reveal that it is…

统计力学 · 物理学 2022-12-16 Sarah A. M. Loos , Saeed Arabha , Ali Rajabpour , Ali Hassanali , Edgar Roldan

Molecules like water have vibrational modes with a zero-point energy well above room temperature. As a consequence, classical molecular dynamics simulations of their liquids largely underestimate the energy of modes with a higher zero-point…

统计力学 · 物理学 2013-05-08 Sriram Ganeshan , Rafael Ramírez , M. V. Fernández-Serra

Molecular dynamics with the stochastic process provides a convenient way to compute structural and thermodynamic properties of chemical, biological, and materials systems. It is demonstrated that the virtual dynamics case that we proposed…

统计力学 · 物理学 2018-03-20 Dezhang Li , Zifei Chen , Zhijun Zhang , Jian Liu

First-principles molecular dynamics simulation based on a plane wave/pseudopotential implementation of density functional theory is adopted to investigate atomic scale energy transport for semiconductors (silicon and germanium). By imposing…

计算物理 · 物理学 2016-02-02 Pengfei Ji , Yuwen Zhang

We present a new and improved method for simultaneous control of temperature and pressure in molecular dynamics simulations with periodic boundary conditions. The thermostat-barostat equations are build on our previously developed…

统计力学 · 物理学 2014-11-20 Niels Grønbech-Jensen , Oded Farago

This paper presents a molecular dynamics simulation of an inelastic gas, where collisions between molecules are characterized by a coefficient of restitution less than unity. The simulation employs an event-driven algorithm to efficiently…

计算物理 · 物理学 2025-02-03 Rameez Farooq Shah , Shikha Kumari , Syed Rashid Ahmad

The understanding and modeling of the heat transport across nanometer and sub-nanometer gaps where the distinction between thermal radiation and conduction become blurred remains an open question. In this work, we present a…

介观与纳米尺度物理 · 物理学 2022-08-17 Yangyu Guo , Christophe Adessi , Manuel Cobian , Samy Merabia

The Langevin equation includes a random force to maintain equilibrium and prevent friction from bringing motion to a standstill; but for ballistic motion, the random force is often neglected. Here, we use the Langevin equation for molecular…

The earliest molecular dynamics simulations relied on solving the Newtonian or equivalently the Hamiltonian equations of motion for a system. While pedagogically very important as the total energy is preserved in these simulations, they…

计算物理 · 物理学 2020-06-04 M Sri Harish , Puneet Kumar Patra

Atomic-scale junctions are a powerful tool to study quantum transport, and are frequently examined through the mechanically controllable break junction technique (MCBJ). The junction-to-junction variation of atomic configurations often…

介观与纳米尺度物理 · 物理学 2014-11-12 Ruoyu Chen , Manuel Matt , Fabian Pauly , Peter Nielaba , Juan Carlos Cuevas , Douglas Natelson

Vibrational heat transport in molecular junctions is a central issue in different contemporary research areas like Chemistry, material science, mechanical engineering, thermoelectrics and power generation. Our model system consists of a…

统计力学 · 物理学 2025-07-04 Jayasmita Behera , Malay Bandyopadhyay

Recent laboratory experiments suggest an intrinsic asymmetry between heating and cooling, with heating occurring more efficiently. Two decades earlier, molecular dynamics (MD) simulations had examined a related setup - heating one side of a…

统计力学 · 物理学 2025-12-04 Hesam Arabzadeh , Brad Lee Holian
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