相关论文: Understanding the Natural Language of DNA using En…

We introduce a new beam search decoder that is fully differentiable, making it possible to optimize at training time through the inference procedure. Our decoder allows us to combine models which operate at different granularities (e.g.…

In our previous work, we proposed a discriminative autoencoder (DcAE) for speech recognition. DcAE combines two training schemes into one. First, since DcAE aims to learn encoder-decoder mappings, the squared error between the reconstructed…

While large language models are primarily used on natural language tasks, they have also shown great promise when adapted to new modalities, e.g., for scientific machine learning tasks. Most proposed approaches for such cross-modal…

Vision transformer based models bring significant improvements for image segmentation tasks. Although these architectures offer powerful capabilities irrespective of specific segmentation tasks, their use of computational resources can be…

This paper investigates the framework of encoder-decoder with attention for sequence labelling based spoken language understanding. We introduce Bidirectional Long Short Term Memory - Long Short Term Memory networks (BLSTM-LSTM) as the…

Transformer-based language models utilize the attention mechanism for substantial performance improvements in almost all natural language processing (NLP) tasks. Similar attention structures are also extensively studied in several other…

Cell-level dense prediction is central to computational pathology, but remains challenging due to fine-grained histological structures, strong domain shifts, and costly dense annotations. Existing ViT-based pathology foundation models rely…

Neural models with an encoder-decoder framework provide a feasible solution to Question Generation (QG). However, after analyzing the model vocabulary we find that current models (both RNN-based and pre-training based) have more than 23\%…

Autoregressive next token prediction language models offer powerful capabilities but face significant challenges in practical deployment due to the high computational and memory costs of inference, particularly during the decoding stage. We…

In this paper, we present a novel Deep Triphone Embedding (DTE) representation derived from Deep Neural Network (DNN) to encapsulate the discriminative information present in the adjoining speech frames. DTEs are generated using a four…

Accelerating deep neural networks (DNNs) has been attracting increasing attention as it can benefit a wide range of applications, e.g., enabling mobile systems with limited computing resources to own powerful visual recognition ability. A…

While model architectures and training strategies have become more generic and flexible with respect to different data modalities over the past years, a persistent limitation lies in the assumption of fixed quantities and arrangements of…

Modeling of large-scale research facilities is extremely challenging due to complex physical processes and engineering problems. Here, we adopt a data-driven approach to model the longitudinal phase-space diagnostic beamline at the…

Surface defect detection is an extremely crucial step to ensure the quality of industrial products. Nowadays, convolutional neural networks (CNNs) based on encoder-decoder architecture have achieved tremendous success in various defect…

The paper explores a novel methodology in source code obfuscation through the application of text-based recurrent neural network (RNN) encoder-decoder models in ciphertext generation and key generation. Sequence-to-sequence models are…

Recent advances in applying deep learning in genomics include DNA-language and single-cell foundation models. However, these models take only one data type as input. We introduce dynamic token adaptation and demonstrate how it combines…

We propose the Nonlinear Regression Convolutional Encoder-Decoder (NRCED), a novel framework for mapping a multivariate input to a multivariate output. In particular, we implement our algorithm within the scope of 12-lead surface…

DNA foundation models have become transformative tools in bioinformatics and healthcare applications. Trained on vast genomic datasets, these models can be used to generate sequence embeddings, dense vector representations that capture…

Nonlinear system identification (NL-SI) has proven to be effective in obtaining accurate models for highly complex systems. Recent encoder-based methods for artificial neural network state-space (ANN-SS) models have shown state-of-the-art…

Masked diffusion models (MDM) exhibit superior generalization when learned using a Partial masking scheme (Prime). This approach converts tokens into sub-tokens and models the diffusion process at the sub-token level. We identify two…