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Birds are important indicators for monitoring both biodiversity and habitat health; they also play a crucial role in ecosystem management. Decline in bird populations can result in reduced eco-system services, including seed dispersal,…

Plants in their natural habitats endure an array of interacting stresses, both biotic and abiotic, that rarely occur in isolation. Nutrient stress-particularly nitrogen deficiency-becomes even more critical when compounded with drought and…

计算机视觉与模式识别 · 计算机科学 2025-09-16 Aswini Kumar Patra , Lingaraj Sahoo

The ocean is filled with phytoplankton that contribute as much photosynthesis as all land plants combined, making them vital to the carbon cycle and climate system. Recent advances in flow cytometry allow oceanographers to measure the…

统计方法学 · 统计学 2026-03-09 Yik Lun Kei , Qi Wang , Paul Parker , Francois Ribalet , Sangwon Hyun

Explaining why the species lives at a particular location is important for understanding ecological systems and conserving biodiversity. However, existing ecological workflows are fragmented and often inaccessible to non-specialists. We…

计算机视觉与模式识别 · 计算机科学 2025-09-10 Yutong Zhou , Masahiro Ryo

Plankton are effective indicators of environmental change and ecosystem health in freshwater habitats, but collection of plankton data using manual microscopic methods is extremely labor-intensive and expensive. Automated plankton imaging…

计算机视觉与模式识别 · 计算机科学 2021-10-27 S. P. Kyathanahally , T. Hardeman , E. Merz , T. Kozakiewicz , M. Reyes , P. Isles , F. Pomati , M. Baity-Jesi

We address the question of how to connect predictions by hydrodynamic models of how sea lice move in water to observable measures that count the number of lice on each fish in a cage in the water. This question is important for management…

Phytoplankton are microscopic algae responsible for roughly half of the world's photosynthesis that play a critical role in global carbon cycles and oxygen production, and measuring the abundance of their subtypes across a wide range of…

统计方法学 · 统计学 2025-10-08 Farhad de Sousa , François Ribalet , Jacob Bien

Measuring biodiversity is crucial for understanding ecosystem health. While prior works have developed machine learning models for taxonomic classification of photographic images and DNA separately, in this work, we introduce a multimodal…

Reduced motor control is one of the most frequent features associated with aging and disease. Nonlinear and fractal analyses have proved to be useful in investigating human physiological alterations with age and disease. Similar findings…

Marine chlorophyll which is present within phytoplankton are the basis of photosynthesis and they have a high significance in sustaining ecological balance as they highly contribute toward global primary productivity and comes under the…

定量方法 · 定量生物学 2023-04-26 Subhrangshu Adhikary , Sudhir Kumar Chaturvedi , Saikat Banerjee , Sourav Basu

Living plants, while contributing to ecological balance and climate regulation, also function as natural sensors capable of transmitting information about their internal physiological states and surrounding conditions. This rich source of…

机器学习 · 计算机科学 2025-07-01 Eduard Buss , Till Aust , Heiko Hamann

Animal behavior analysis plays a crucial role in understanding animal welfare, health status, and productivity in agricultural settings. However, traditional manual observation methods are time-consuming, subjective, and limited in…

计算机视觉与模式识别 · 计算机科学 2026-05-11 Haiyu Yang , Enhong Liu , Jennifer Sun , Sumit Sharma , Meike van Leerdam , Sebastien Franceschini , Puchun Niu , Miel Hostens

Plant phenology, the study of cyclical events such as leafing out, flowering, or fruiting, has wide ecological impacts but is broadly understudied, especially in the tropics. Image analysis has greatly enhanced remote phenological…

计算机视觉与模式识别 · 计算机科学 2026-03-10 Luke Meyers , Anirudh Potlapally , Yuyan Chen , Mike Long , Tanya Berger-Wolf , Hari Subramoni , Remi Megret , Daniel Rubenstein

Progress in molecular methods has enabled the monitoring of bacterial populations in time. Nevertheless, understanding community dynamics and its links with ecosystem functioning remains challenging due to the tremendous diversity of…

种群与进化 · 定量生物学 2022-08-11 Jana C. Massing , Ashkaan Fahimipour , Carina Bunse , Jarone Pinhassi , Thilo Gross

Image segmentation is a crucial step in various visual applications, including environmental monitoring through remote sensing. In the context of the ForestEyes project, which combines citizen science and machine learning to detect…

计算机视觉与模式识别 · 计算机科学 2025-10-07 Hugo Resende , Fabio A. Faria , Eduardo B. Neto , Isabela Borlido , Victor Sundermann , Silvio Jamil F. Guimarães , Álvaro L. Fazenda

The human microbiome is a complex ecological system, and describing its structure and function under different environmental conditions is important from both basic scientific and medical perspectives. Viewed through a biostatistical lens,…

应用统计 · 统计学 2017-11-17 Kris Sankaran , Susan P. Holmes

Marine ecosystems are in the spotlight, because environmental changes are threatening biodiversity and ecological functions. In this context, microalgae play key ecological roles both in planktonic and benthic ecosystems. Consequently, they…

This paper proposes a novel framework for fluorescence plant video processing. The plant research community is interested in the leaf-level photosynthetic analysis within a plant. A prerequisite for such analysis is to segment all leaves,…

计算机视觉与模式识别 · 计算机科学 2017-05-10 Xi Yin , Xiaoming Liu , Jin Chen , David M. Kramer

The analysis of benthic assemblages is a valuable tool to describe the ecological status of transitional water ecosystems, but species are extremely sensitive and respond to both microhabitat and seasonal differences. The identification of…

种群与进化 · 定量生物学 2017-05-25 Giovanna Jona Lasinio , Alessio Pollice , Eric Marcon , Elisa Anna Fano

Data acquisition in animal ecology is rapidly accelerating due to inexpensive and accessible sensors such as smartphones, drones, satellites, audio recorders and bio-logging devices. These new technologies and the data they generate hold…