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Machine learning approaches have become popular for molecular modeling tasks, including molecular force fields and properties prediction. Traditional supervised learning methods suffer from scarcity of labeled data for particular tasks,…

化学物理 · 物理学 2022-11-29 Xiang Gao , Weihao Gao , Wenzhi Xiao , Zhirui Wang , Chong Wang , Liang Xiang

Pre-trained language models have recently emerged as a powerful tool for fine-tuning a variety of language tasks. Ideally, when models are pre-trained on large amount of data, they are expected to gain implicit knowledge. In this paper, we…

计算与语言 · 计算机科学 2023-06-22 Mohamad Ballout , Ulf Krumnack , Gunther Heidemann , Kai-Uwe Kühnberger

Transfer learning refers to the process of adapting a model trained on a source task to a target task. While kernel methods are conceptually and computationally simple machine learning models that are competitive on a variety of tasks, it…

机器学习 · 计算机科学 2022-11-02 Adityanarayanan Radhakrishnan , Max Ruiz Luyten , Neha Prasad , Caroline Uhler

Probabilistic Transformer (PT), a white-box probabilistic model for contextual word representation, has demonstrated substantial similarity to standard Transformers in both computational structure and downstream task performance on small…

计算与语言 · 计算机科学 2026-04-29 Penghao Kuang , Haoyi Wu , Kewei Tu

Code pre-trained models (CodePTMs) have recently demonstrated a solid capacity to process various software intelligence tasks, e.g., code clone detection, code translation, and code summarization. The current mainstream method that deploys…

软件工程 · 计算机科学 2024-05-10 Qiushi Sun , Nuo Chen , Jianing Wang , Xiang Li , Ming Gao

Molecular property prediction is essential in chemistry, especially for drug discovery applications. However, available molecular property data is often limited, encouraging the transfer of information from related data. Transfer learning…

机器学习 · 计算机科学 2022-07-07 Johan Broberg , Maria Bånkestad , Erik Ylipää

We apply a Transformer architecture, specifically BERT, to learn flexible and high quality molecular representations for drug discovery problems. We study the impact of using different combinations of self-supervised tasks for pre-training,…

机器学习 · 计算机科学 2020-11-30 Benedek Fabian , Thomas Edlich , Héléna Gaspar , Marwin Segler , Joshua Meyers , Marco Fiscato , Mohamed Ahmed

Large Transformer-based language models are pre-trained on corpora of varying sizes, for a different number of steps and with different batch sizes. At the same time, more fundamental components, such as the pre-training objective or…

计算与语言 · 计算机科学 2021-05-12 M. Aßenmacher , P. Schulze , C. Heumann

Retrosynthesis is a problem to infer reactant compounds to synthesize a given product compound through chemical reactions. Recent studies on retrosynthesis focus on proposing more sophisticated prediction models, but the dataset to feed the…

机器学习 · 计算机科学 2020-10-05 Katsuhiko Ishiguro , Kazuya Ujihara , Ryohto Sawada , Hirotaka Akita , Masaaki Kotera

Transformers have shown great promise as an approach to Neural Machine Translation (NMT) for low-resource languages. However, at the same time, transformer models remain difficult to optimize and require careful tuning of hyper-parameters…

计算与语言 · 计算机科学 2020-04-16 Elan van Biljon , Arnu Pretorius , Julia Kreutzer

While deep learning has revolutionized research and applications in NLP and computer vision, this has not yet been the case for behavioral modeling and behavioral health applications. This is because the domain's datasets are smaller, have…

机器学习 · 计算机科学 2021-07-14 Mike A. Merrill , Tim Althoff

The Transformer architecture and transfer learning have marked a quantum leap in natural language processing, improving the state of the art across a range of text-based tasks. This paper examines how these advancements can be applied to…

软件工程 · 计算机科学 2022-08-29 Pasquale Salza , Christoph Schwizer , Jian Gu , Harald C. Gall

Machine learning has revolutionized polymer science by enabling rapid property prediction and generative design. Large language models (LLMs) offer further opportunities in polymer informatics by simplifying workflows that traditionally…

计算工程、金融与科学 · 计算机科学 2026-02-20 Sonakshi Gupta , Akhlak Mahmood , Shivank Shukla , Rampi Ramprasad

Developing machine learning-based interatomic potentials from ab-initio electronic structure methods remains a challenging task for computational chemistry and materials science. This work studies the capability of transfer learning, in…

计算物理 · 物理学 2023-03-22 Viktor Zaverkin , David Holzmüller , Luca Bonfirraro , Johannes Kästner

Transformer-based models for transfer learning have the potential to achieve high prediction accuracies on text-based supervised learning tasks with relatively few training data instances. These models are thus likely to benefit social…

计算与语言 · 计算机科学 2022-09-01 Sandra Wankmüller

In-context learning enables transformer models to generalize to new tasks based solely on input prompts, without any need for weight updates. However, existing training paradigms typically rely on large, unstructured datasets that are…

Scientific research faces high costs and inefficiencies with traditional methods, but the rise of deep learning and large language models (LLMs) offers innovative solutions. This survey reviews transformer-based LLM applications across…

机器学习 · 计算机科学 2025-09-16 Kaiyuan Tian , Linbo Qiao , Baihui Liu , Gongqingjian Jiang , Shanshan Li , Dongsheng Li

Machine-learned interatomic potentials are revolutionising atomistic materials simulations by providing accurate and scalable predictions within the scope covered by the training data. However, generation of an accurate and robust training…

Parameter-efficient fine-tuning approaches have recently garnered a lot of attention. Having considerably lower number of trainable weights, these methods can bring about scalability and computational effectiveness. In this paper, we look…

计算与语言 · 计算机科学 2023-02-23 Mohammad Akbar-Tajari , Sara Rajaee , Mohammad Taher Pilehvar

Molecules have a number of distinct properties whose importance and application vary. Often, in reality, labels for some properties are hard to achieve despite their practical importance. A common solution to such data scarcity is to use…

机器学习 · 计算机科学 2024-10-02 Chanhui Lee , Dae-Woong Jeong , Sung Moon Ko , Sumin Lee , Hyunseung Kim , Soorin Yim , Sehui Han , Sungwoong Kim , Sungbin Lim