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A metric phylogenetic tree relating a collection of taxa induces weighted rooted triples and weighted quartets for all subsets of three and four taxa, respectively. New intertaxon distances are defined that can be calculated from these…

种群与进化 · 定量生物学 2020-02-12 Samaneh Yourdkhani , John A. Rhodes

This paper presents a MaxSAT benchmark focused on the identification of Maximum Probability Minimal Cut Sets (MPMCSs) in fault trees. We address the MPMCS problem by transforming the input fault tree into a weighted logical formula that is…

密码学与安全 · 计算机科学 2020-07-17 Martín Barrère , Chris Hankin

By considering the parity of the degrees and levels of nodes in increasing trees, a new combinatorial interpretation for the coefficients of the Taylor expansions of the Jacobi elliptic functions is found. As one application of this new…

组合数学 · 数学 2021-09-15 Zhicong Lin , Jun Ma

The problem of maximum-likelihood (ML) estimation of discrete tree-structured distributions is considered. Chow and Liu established that ML-estimation reduces to the construction of a maximum-weight spanning tree using the empirical mutual…

机器学习 · 统计学 2016-11-15 Vincent Y. F. Tan , Animashree Anandkumar , Lang Tong , Alan S. Willsky

This paper describes a generalization of previous methods for constructing tree-structured belief network with hidden variables. The major new feature of the described method is the ability to produce a tree decomposition even when there…

人工智能 · 计算机科学 2013-04-05 L. Liu , Y. Ma , D. Wilkins , Z. Bian , X. Ying

Understanding the evolution of a set of genes or species is a fundamental problem in evolutionary biology. The problem we study here takes as input a set of trees describing {possibly discordant} evolutionary scenarios for a given set of…

数据结构与算法 · 计算机科学 2019-07-10 Cedric Chauve , Mark Jones , Manuel Lafond , Céline Scornavacca , Mathias Weller

We define a notion of substitution on colored binary trees that we call substreetution. We show that a fixed point by a substreetution may be (or not) almost periodic, thus the closure of the orbit under $\mathbb{F}_2^+$-action may (or not)…

动力系统 · 数学 2022-01-07 A. Baraviera , R. Leplaideur

In this paper we study a polynomial time algorithms that for an input $A\subseteq {B_m}$ outputs a decision tree for $A$ of minimum depth. This problem has many applications that include, to name a few, computer vision, group testing, exact…

数据结构与算法 · 计算机科学 2018-02-02 Nader H. Bshouty , Waseem Makhoul

Graph polynomials encode fundamental combinatorial invariants of graphs. Their computation is investigated using tree and path decomposition frameworks, with formal definitions of treewidth, k-trees, and pathwidth establishing the…

离散数学 · 计算机科学 2025-09-29 Mehul Bafna , Shaghik Amirian

The Ward numbers $W(n,k)$ combinatorially enumerate set partitions with block sizes $\geq 2$ and phylogenetic trees (total partition trees). We prove that $W(n,k)$ also counts \emph{increasing Schr\"oder trees} by verifying they satisfy…

组合数学 · 数学 2025-07-22 Elena L. Wang , Guoce Xin

The Minimum Size Tree Decomposition (MSTD) and Minimum Size Path Decomposition (MSPD) problems ask for a given n-vertex graph G and integer k, what is the minimum number of bags of a tree decomposition (respectively, path decomposition) of…

数据结构与算法 · 计算机科学 2016-05-05 Hans L. Bodlaender , Jesper Nederlof

A distributed proof (also known as local certification, or proof-labeling scheme) is a mechanism to certify that the solution to a graph problem is correct. It takes the form of an assignment of labels to the nodes, that can be checked…

分布式、并行与集群计算 · 计算机科学 2020-01-03 Laurent Feuilloley

We develop basic cluster theory from an elementary point of view using a variation of binary trees which we call mixed cobinary trees. We show that the number of isomorphism classes of such trees is given by the Catalan number Cn where n is…

组合数学 · 数学 2013-08-12 Kiyoshi Igusa , Jonah Ostroff

Extreme classification problems are multiclass and multilabel classification problems where the number of outputs is so large that straightforward strategies are neither statistically nor computationally viable. One strategy for dealing…

机器学习 · 统计学 2016-02-05 Paul Mineiro , Nikos Karampatziakis

We give an independent combinatorial proof of Nogin's Theorem concerning the minimum distance of the Grassmann codes using a special decomposition of the Grassmannians. We use the same idea to also compute the second minimum weight of the…

组合数学 · 数学 2025-08-27 Mrinmoy Datta , Tiasa Dutta

It is well known that finding extremal values and structures can be hard in weighted graphs. However, if the weights are random, this problem can become way easier. In this paper, we examine the minimal weight of a union of $k$…

组合数学 · 数学 2025-02-13 Dmitry Shabanov , Nikita Zvonkov

We study the problem of partitioning a set of $n$ objects in a metric space into $k$ clusters $V_1,\dots,V_k$. The quality of the clustering is measured by considering the vector of cluster costs and then minimizing some monotone symmetric…

数据结构与算法 · 计算机科学 2025-01-10 Matthias Kaul , Kelin Luo , Matthias Mnich , Heiko Röglin

A $k$-universal permutation, or $k$-superpermutation, is a permutation that contains all permutations of length $k$ as patterns. The problem of finding the minimum length of a $k$-superpermutation has recently received significant attention…

组合数学 · 数学 2020-05-19 Colin Defant , Noah Kravitz , Ashwin Sah

We state a kind of Euclidian division theorem: given a polynomial P(x) and a divisor d of the degree of P, there exist polynomials h(x),Q(x),R(x) such that P(x) = h(Q(x)) +R(x), with deg h=d. Under some conditions h,Q,R are unique, and Q is…

代数几何 · 数学 2009-10-12 Arnaud Bodin

Given an undirected graph $G = (V, E)$ and a weight function $w:E \to \mathbb{R}$, the \textsc{Minimum Dominating Tree} problem asks to find a minimum weight sub-tree of $G$, $T = (U, F)$, such that every $v \in V \setminus U$ is adjacent…

计算复杂性 · 计算机科学 2018-02-14 Gilad Kutiel