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相关论文: MolCA: Molecular Graph-Language Modeling with Cros…

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Large language models (LLMs) have shown remarkable in-context learning (ICL) capabilities on textual data. We explore whether these capabilities can be extended to continuous vectors from diverse domains, obtained from black-box pretrained…

计算与语言 · 计算机科学 2025-02-21 Yufan Zhuang , Chandan Singh , Liyuan Liu , Jingbo Shang , Jianfeng Gao

In recent years, the growing demand for medical imaging diagnosis has placed a significant burden on radiologists. As a solution, Medical Vision-Language Pre-training (Med-VLP) methods have been proposed to learn universal representations…

计算机视觉与模式识别 · 计算机科学 2023-10-24 Ke Zhang , Yan Yang , Jun Yu , Hanliang Jiang , Jianping Fan , Qingming Huang , Weidong Han

Recently many efforts have been devoted to applying graph neural networks (GNNs) to molecular property prediction which is a fundamental task for computational drug and material discovery. One of major obstacles to hinder the successful…

机器学习 · 计算机科学 2021-09-27 Shuangli Li , Jingbo Zhou , Tong Xu , Dejing Dou , Hui Xiong

In the real world, a molecule is a 3D geometric structure. Compared to 1D SMILES sequences and 2D molecular graphs, 3D molecules represent the most informative molecular modality. Despite the rapid progress of autoregressive-based language…

计算工程、金融与科学 · 计算机科学 2025-08-15 Lei Jiang , Shuzhou Sun , Biqing Qi , Yuchen Fu , Xiaohua Xu , Yuqiang Li , Dongzhan Zhou , Tianfan Fu

Two-Tower Vision-Language (VL) models have shown promising improvements on various downstream VL tasks. Although the most advanced work improves performance by building bridges between encoders, it suffers from ineffective layer-by-layer…

计算机视觉与模式识别 · 计算机科学 2023-06-02 Xiao Xu , Bei Li , Chenfei Wu , Shao-Yen Tseng , Anahita Bhiwandiwalla , Shachar Rosenman , Vasudev Lal , Wanxiang Che , Nan Duan

Large language models (LLMs) are introducing a paradigm shift in molecular discovery by enabling text-guided interaction with chemical spaces through natural language, symbolic notations, with emerging extensions to incorporate multi-modal…

机器学习 · 计算机科学 2025-05-23 Ziqing Wang , Kexin Zhang , Zihan Zhao , Yibo Wen , Abhishek Pandey , Han Liu , Kaize Ding

Multi-modal neural machine translation (NMT) aims to translate source sentences into a target language paired with images. However, dominant multi-modal NMT models do not fully exploit fine-grained semantic correspondences between semantic…

计算与语言 · 计算机科学 2020-07-20 Yongjing Yin , Fandong Meng , Jinsong Su , Chulun Zhou , Zhengyuan Yang , Jie Zhou , Jiebo Luo

While current diffusion-based models, typically built on U-Net architectures, have shown promising results on the text-to-motion generation task, they still suffer from semantic misalignment and kinematic artifacts. Through analysis, we…

计算机视觉与模式识别 · 计算机科学 2025-10-01 Haozhe Jia , Wenshuo Chen , Yuqi Lin , Yang Yang , Lei Wang , Mang Ning , Bowen Tian , Songning Lai , Nanqian Jia , Yifan Chen , Yutao Yue

Molecular graph representation learning is a fundamental problem in modern drug and material discovery. Molecular graphs are typically modeled by their 2D topological structures, but it has been recently discovered that 3D geometric…

机器学习 · 计算机科学 2022-05-31 Shengchao Liu , Hanchen Wang , Weiyang Liu , Joan Lasenby , Hongyu Guo , Jian Tang

Multimodal large language models (MLLMs) have made impressive progress in many applications in recent years. However, chemical MLLMs that can handle cross-modal understanding and generation remain underexplored. To fill this gap, we propose…

机器学习 · 计算机科学 2025-08-05 Qian Tan , Dongzhan Zhou , Peng Xia , Wanhao Liu , Wanli Ouyang , Lei Bai , Yuqiang Li , Tianfan Fu

Document Visual Question Answering (DocVQA) requires models to jointly understand textual semantics, spatial layout, and visual features. Current methods struggle with explicit spatial relationship modeling, inefficiency with…

计算机视觉与模式识别 · 计算机科学 2025-11-25 Ahmad Mohammadshirazi , Pinaki Prasad Guha Neogi , Dheeraj Kulshrestha , Rajiv Ramnath

In the field of chemistry, the objective is to create novel molecules with desired properties, facilitating accurate property predictions for applications such as material design and drug screening. However, existing graph deep learning…

机器学习 · 计算机科学 2024-08-28 Sakhinana Sagar Srinivas , Venkataramana Runkana

To learn accurate representations of molecules, it is essential to consider both chemical and geometric features. To encode geometric information, many descriptors have been proposed in constrained circumstances for specific types of…

机器学习 · 计算机科学 2023-07-25 Shuo Zhang , Yang Liu , Li Xie , Lei Xie

Large Language Models (LLMs) have achieved impressive results in processing text data, which has sparked interest in applying these models beyond textual data, such as graphs. In the field of graph learning, there is a growing interest in…

人工智能 · 计算机科学 2024-10-10 Sheng Ouyang , Yulan Hu , Ge Chen , Yong Liu

Graph contrastive learning is usually performed by first conducting Graph Data Augmentation (GDA) and then employing a contrastive learning pipeline to train GNNs. As we know that GDA is an important issue for graph contrastive learning.…

机器学习 · 计算机科学 2024-01-09 Ziyan Zhang , Bo Jiang , Jin Tang , Bin Luo

In the molecular domain, numerous studies have explored the use of multimodal large language models (LLMs) to construct a general-purpose, multi-task molecular model. However, these efforts are still far from achieving a truly universal…

机器学习 · 计算机科学 2025-10-31 Chengxin Hu , Hao Li , Yihe Yuan , Zezheng Song , Chenyang Zhao , Haixin Wang

Molecular property prediction has attracted substantial attention recently. Accurate prediction of drug properties relies heavily on effective molecular representations. The structures of chemical compounds are commonly represented as…

机器学习 · 计算机科学 2025-08-05 Anyin Zhao , Zuquan Chen , Zhengyu Fang , Xiaoge Zhang , Jing Li

A graph is a fundamental data model to represent various entities and their complex relationships in society and nature, such as social networks, transportation networks, and financial networks. Recently, large language models (LLMs) have…

计算与语言 · 计算机科学 2025-07-08 Wenbo Shang , Xin Huang

Despite the promising results of large multimodal models (LMMs) in complex vision-language tasks that require knowledge, reasoning, and perception abilities together, we surprisingly found that these models struggle with simple tasks on…

图形学 · 计算机科学 2025-03-17 Kai Zhang , Jianwei Yang , Jeevana Priya Inala , Chandan Singh , Jianfeng Gao , Yu Su , Chenglong Wang

Vision-Language Models (VLMs) have demonstrated remarkable capabilities in aligning and understanding multimodal signals, yet their potential to reason over structured data, where multimodal entities are connected through explicit…

计算机视觉与模式识别 · 计算机科学 2026-03-17 Jiajin Liu , Dongzhe Fan , Chuanhao Ji , Daochen Zha , Qiaoyu Tan