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Machine learning models are poised to make a transformative impact on chemical sciences by dramatically accelerating computational algorithms and amplifying insights available from computational chemistry methods. However, achieving this…

Transformer-based language models (LMs) continue to achieve state-of-the-art performance on natural language processing (NLP) benchmarks, including tasks designed to mimic human-inspired "commonsense" competencies. To better understand the…

计算与语言 · 计算机科学 2022-05-13 Antonio Laverghetta , Animesh Nighojkar , Jamshidbek Mirzakhalov , John Licato

The increased energy and power density required in modern electronics poses a challenge for designing new dielectric polymer materials with high energy density while maintaining low loss at high applied electric fields. Recently, an…

We apply a Transformer architecture, specifically BERT, to learn flexible and high quality molecular representations for drug discovery problems. We study the impact of using different combinations of self-supervised tasks for pre-training,…

机器学习 · 计算机科学 2020-11-30 Benedek Fabian , Thomas Edlich , Héléna Gaspar , Marwin Segler , Joshua Meyers , Marco Fiscato , Mohamed Ahmed

Polymers, macromolecules formed from covalently bonded monomers, underpin countless technologies and are indispensable to modern life. While deep learning is advancing polymer science, existing methods typically represent the whole polymer…

机器学习 · 计算机科学 2025-10-21 Fanmeng Wang , Shan Mei , Wentao Guo , Hongshuai Wang , Qi Ou , Zhifeng Gao , Hongteng Xu

GNNs and chemical fingerprints are the predominant approaches to representing molecules for property prediction. However, in NLP, transformers have become the de-facto standard for representation learning thanks to their strong downstream…

机器学习 · 计算机科学 2020-10-26 Seyone Chithrananda , Gabriel Grand , Bharath Ramsundar

Protein language models (PLMs) have shown promise in improving the understanding of protein sequences, contributing to advances in areas such as function prediction and protein engineering. However, training these models from scratch…

机器学习 · 计算机科学 2024-12-19 Shivasankaran Vanaja Pandi , Bharath Ramsundar

Deep transformer models have pushed performance on NLP tasks to new limits, suggesting sophisticated treatment of complex linguistic inputs, such as phrases. However, we have limited understanding of how these models handle representation…

计算与语言 · 计算机科学 2020-10-15 Lang Yu , Allyson Ettinger

Contextual word representations derived from large-scale neural language models are successful across a diverse set of NLP tasks, suggesting that they encode useful and transferable features of language. To shed light on the linguistic…

计算与语言 · 计算机科学 2019-04-29 Nelson F. Liu , Matt Gardner , Yonatan Belinkov , Matthew E. Peters , Noah A. Smith

Large language models (LLMs) offer new opportunities for automated data extraction and property prediction across materials science, yet their use in superconductivity research remains limited. Here we construct a large experimental…

材料科学 · 物理学 2025-12-12 Suman Itani , Yibo Zhang , Ranjit Itani , Jiadong Zang

We describe a fully data driven model that learns to perform a retrosynthetic reaction prediction task, which is treated as a sequence-to-sequence mapping problem. The end-to-end trained model has an encoder-decoder architecture that…

Predictive materials synthesis is the primary bottleneck in realizing new functional and quantum materials. Strategies for synthesis of promising materials are currently identified by time-consuming trial and error approaches and there are…

Polymers are high-molecular-weight compounds constructed by the covalent bonding of numerous identical or similar monomers so that their 3D structures are complex yet exhibit unignorable regularity. Typically, the properties of a polymer,…

机器学习 · 计算机科学 2024-07-29 Fanmeng Wang , Wentao Guo , Minjie Cheng , Shen Yuan , Hongteng Xu , Zhifeng Gao

Polymer composite materials require softening to reduce their glass transition temperature and improve processability. To this end, plasticizers, which are small organic molecules, are added to the polymer matrix. The miscibility of these…

Machine-learned interatomic potentials are revolutionising atomistic materials simulations by providing accurate and scalable predictions within the scope covered by the training data. However, generation of an accurate and robust training…

A mathematical model to describe the emulsion polymerization kinetics of co- and ter-polymerizations is developed. The model is based on the classical Smith-Ewart (SE) equations, within the pseudo-homopolymerization approach, with…

化学物理 · 物理学 2020-07-31 Luca Banetta , Giuseppe Storti , George Hoogard , Gareth Simpson , Alessio Zaccone

The ability of machine learning models to store input information in hidden layer vector embeddings, analogous to the concept of `memory', is widely employed but not well characterized. We find that language model embeddings typically…

计算与语言 · 计算机科学 2026-05-20 Benjamin L. Badger

Chemical Language Models (CLMs) pre-trained on large scale molecular data are widely used for molecular property prediction. However, the common belief that increasing training resources such as model size, dataset size, and training…

机器学习 · 计算机科学 2026-05-14 Tatsuya Sagawa , Ryosuke Kojima

Much of the knowledge encoded in transformer language models (LMs) may be expressed in terms of relations: relations between words and their synonyms, entities and their attributes, etc. We show that, for a subset of relations, this…

Constructing first principles models is a challenging task for nonlinear and complex systems such as a wastewater treatment unit. In recent years, data-driven models are widely used to overcome the complexity. However, they often suffer…

机器学习 · 计算机科学 2024-01-23 Ece S. Koksal , Erdal Aydin