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We give a greedy learning algorithm for reconstructing an evolutionary tree based on a certain harmonic average on triplets of terminal taxa. After the pairwise distances between terminal taxa are estimated from sequence data, the algorithm…

数据结构与算法 · 计算机科学 2007-05-23 Miklos Csuros , Ming-Yang Kao

Networks underpin systems that range from finance to biology, yet their structure is often only partially observed. Current reconstruction methods typically fit the parameters of a model anew to each snapshot, thus offering no guidance to…

物理与社会 · 物理学 2026-05-28 Mattia Marzi , Tiziano Squartini

A Bayesian network is a widely used probabilistic graphical model with applications in knowledge discovery and prediction. Learning a Bayesian network (BN) from data can be cast as an optimization problem using the well-known…

人工智能 · 计算机科学 2020-09-01 Zhenyu A. Liao , Charupriya Sharma , James Cussens , Peter van Beek

In multivariate data analysis, it is often important to estimate a graph characterizing dependence among (p) variables. A popular strategy uses the non-zero entries in a (p\times p) covariance or precision matrix, typically requiring…

统计方法学 · 统计学 2021-07-01 Leo L. Duan , David B. Dunson

Learning Bayesian Networks (BNs) from high-dimensional data is a complex and time-consuming task. Although there are approaches based on horizontal (instances) or vertical (variables) partitioning in the literature, none can guarantee the…

机器学习 · 计算机科学 2024-09-23 Jorge D. Laborda , Pablo Torrijos , José M. Puerta , José A. Gámez

We study constraint-based structure learning of Markov networks and Bayesian networks in the presence of an unreliable conditional independence oracle that makes at most a bounded number of errors. For Markov networks, we observe that a low…

机器学习 · 计算机科学 2026-03-11 Juha Harviainen , Pekka Parviainen , Vidya Sagar Sharma

Nonparametric estimation of the conditional distribution of a response given high-dimensional features is a challenging problem. It is important to allow not only the mean but also the variance and shape of the response density to change…

机器学习 · 统计学 2013-12-05 Francesca Petralia , Joshua Vogelstein , David B. Dunson

We introduce an exact distributed algorithm to train Random Forest models as well as other decision forest models without relying on approximating best split search. We explain the proposed algorithm and compare it to related approaches for…

机器学习 · 计算机科学 2018-04-19 Mathieu Guillame-Bert , Olivier Teytaud

A Bayesian Network (BN) is a probabilistic model that represents a set of variables using a directed acyclic graph (DAG). Current algorithms for learning BN structures from data focus on estimating the edges of a specific DAG, and often…

组合数学 · 数学 2022-10-17 Luke Duttweiler , Sally W. Thurston , Anthony Almudevar

In variational inference, the benefits of Bayesian models rely on accurately capturing the true posterior distribution. We propose using neural samplers that specify implicit distributions, which are well-suited for approximating complex…

机器学习 · 计算机科学 2023-11-10 Anshuk Uppal , Kristoffer Stensbo-Smidt , Wouter Boomsma , Jes Frellsen

Bayes nets are extensively used in practice to efficiently represent joint probability distributions over a set of random variables and capture dependency relations. In a seminal paper, Chickering et al. (JMLR 2004) showed that given a…

机器学习 · 计算机科学 2024-08-06 Arnab Bhattacharyya , Davin Choo , Sutanu Gayen , Dimitrios Myrisiotis

The estimation of Bayesian networks given high-dimensional data, in particular gene expression data, has been the focus of much recent research. Whilst there are several methods available for the estimation of such networks, these typically…

统计方法学 · 统计学 2011-12-01 Jessica Kasza , Gary Glonek , Patty Solomon

In this paper we propose a novel method which leverages the uncertainty measures provided by Bayesian deep networks through curriculum learning so that the uncertainty estimates are fed back to the system to resample the training data more…

计算机视觉与模式识别 · 计算机科学 2021-08-27 Sora Iwamoto , Bisser Raytchev , Toru Tamaki , Kazufumi Kaneda

This paper considers the problem of testing the maximum in-degree of the Bayes net underlying an unknown probability distribution $P$ over $\{0,1\}^n$, given sample access to $P$. We show that the sample complexity of the problem is…

机器学习 · 计算机科学 2023-04-17 Vipul Arora , Arnab Bhattacharyya , Clément L. Canonne , Joy Qiping Yang

The problem of learning the structure of Bayesian networks from complete discrete data with a limit on parent set size is considered. Learning is cast explicitly as an optimisation problem where the goal is to find a BN structure which…

人工智能 · 计算机科学 2012-02-20 James Cussens

The graph of a Bayesian Network (BN) can be machine learned, determined by causal knowledge, or a combination of both. In disciplines like bioinformatics, applying BN structure learning algorithms can reveal new insights that would…

人工智能 · 计算机科学 2021-02-03 Anthony C. Constantinou , Norman Fenton , Martin Neil

The seminal work of Chow and Liu (1968) shows that approximation of a finite probabilistic system by Markov trees can achieve the minimum information loss with the topology of a maximum spanning tree. Our current paper generalizes the…

数据结构与算法 · 计算机科学 2018-01-23 Liang Ding , Di Chang , Russell Malmberg , Aaron Martinez , David Robinson , Matthew Wicker , Hongfei Yan , Liming Cai

We investigate active learning by pairwise similarity over the leaves of trees originating from hierarchical clustering procedures. In the realizable setting, we provide a full characterization of the number of queries needed to achieve…

机器学习 · 计算机科学 2019-10-15 Fabio Vitale , Anand Rajagopalan , Claudio Gentile

Reconstructing weighted networks from partial information is necessary in many important circumstances, e.g. for a correct estimation of systemic risk. It has been shown that, in order to achieve an accurate reconstruction, it is crucial to…

物理与社会 · 物理学 2017-03-07 Tiziano Squartini , Giulio Cimini , Andrea Gabrielli , Diego Garlaschelli

Learning the structure of Bayesian networks is a difficult combinatorial optimization problem. In this paper, we consider learning of tree-augmented naive Bayes (TAN) structures for Bayesian network classifiers with discrete input features.…

机器学习 · 计算机科学 2020-08-24 Wolfgang Roth , Franz Pernkopf
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