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Semantic segmentation is one of the most popular research areas in medical image computing. Perhaps surprisingly, despite its conceptualization dating back to 2018, nnU-Net continues to provide competitive out-of-the-box solutions for a…

图像与视频处理 · 电气工程与系统科学 2022-08-24 Fabian Isensee , Constantin Ulrich , Tassilo Wald , Klaus H. Maier-Hein

Biomedical imaging is a driver of scientific discovery and core component of medical care, currently stimulated by the field of deep learning. While semantic segmentation algorithms enable 3D image analysis and quantification in many…

计算机视觉与模式识别 · 计算机科学 2020-12-09 Fabian Isensee , Paul F. Jäger , Simon A. A. Kohl , Jens Petersen , Klaus H. Maier-Hein

Automated lesion segmentation in PET/CT scans is crucial for improving clinical workflows and advancing cancer diagnostics. However, the task is challenging due to physiological variability, different tracers used in PET imaging, and…

图像与视频处理 · 电气工程与系统科学 2024-10-22 Maximilian Rokuss , Balint Kovacs , Yannick Kirchhoff , Shuhan Xiao , Constantin Ulrich , Klaus H. Maier-Hein , Fabian Isensee

The U-Net was presented in 2015. With its straight-forward and successful architecture it quickly evolved to a commonly used benchmark in medical image segmentation. The adaptation of the U-Net to novel problems, however, comprises several…

Cloud detection is a pivotal satellite image pre-processing step that can be performed both on the ground and on board a satellite to tag useful images. In the latter case, it can help to reduce the amount of data to downlink by pruning the…

计算机视觉与模式识别 · 计算机科学 2022-10-26 Bartosz Grabowski , Maciej Ziaja , Michal Kawulok , Nicolas Longépé , Bertrand Le Saux , Jakub Nalepa

Biomedical image segmentation is critical for precise structure delineation and downstream analysis. Traditional methods often struggle with noisy data, while deep learning models such as U-Net have set new benchmarks in segmentation…

计算机视觉与模式识别 · 计算机科学 2025-11-10 Shuo Zhao , Yu Zhou , Jianxu Chen

Lesion segmentation in PET/CT imaging is essential for precise tumor characterization, which supports personalized treatment planning and enhances diagnostic precision in oncology. However, accurate manual segmentation of lesions is…

图像与视频处理 · 电气工程与系统科学 2024-09-19 Hamza Kalisch , Fabian Hörst , Ken Herrmann , Jens Kleesiek , Constantin Seibold

Tumor segmentation in whole-body PET/CT imaging is crucial for precise disease evaluation and treatment planning. However, it remains challenging due to variability in lesion size, contrast, and anatomical distribution. Relying on manual…

计算机视觉与模式识别 · 计算机科学 2026-05-12 Hussain Alasmawi

Neural sequence-to-sequence models, particularly the Transformer, are the state of the art in machine translation. Yet these neural networks are very sensitive to architecture and hyperparameter settings. Optimizing these settings by grid…

计算与语言 · 计算机科学 2019-10-16 Kenton Murray , Jeffery Kinnison , Toan Q. Nguyen , Walter Scheirer , David Chiang

In this study, we implemented a two-stage deep learning-based approach to segment lesions in PET/CT images for the AutoPET III challenge. The first stage utilized a DynUNet model for coarse segmentation, identifying broad regions of…

图像与视频处理 · 电气工程与系统科学 2024-09-23 Reza Safdari , Mohammad Koohi-Moghaddam , Kyongtae Tyler Bae

For the last three years, the AutoPET competition gathered the medical imaging community around a hot topic: lesion segmentation on Positron Emitting Tomography (PET) scans. Each year a different aspect of the problem is presented; in 2024…

图像与视频处理 · 电气工程与系统科学 2025-09-05 Zacharia Mesbah , Léo Mottay , Romain Modzelewski , Pierre Decazes , Sébastien Hapdey , Su Ruan , Sébastien Thureau

We propose a UNet-based foundation model and its self-supervised learning method to address two key challenges: 1) lack of qualified annotated analog layout data, and 2) excessive variety in analog layout design tasks. For self-supervised…

信号处理 · 电气工程与系统科学 2025-11-25 Sungyu Jeong , Won Joon Choi , Junung Choi , Anik Biswas , Byungsub Kim

This paper presents our approach to scaling the nnU-Net framework for multi-structure segmentation on Cone Beam Computed Tomography (CBCT) images, specifically in the scope of the ToothFairy2 Challenge. We leveraged the nnU-Net ResEnc L…

计算机视觉与模式识别 · 计算机科学 2024-12-03 Fabian Isensee , Yannick Kirchhoff , Lars Kraemer , Maximilian Rokuss , Constantin Ulrich , Klaus H. Maier-Hein

Language models often pre-train on large unsupervised text corpora, then fine-tune on additional task-specific data. However, typical fine-tuning schemes do not prioritize the examples that they tune on. We show that, if you can prioritize…

计算与语言 · 计算机科学 2023-05-12 Ian Osband , Seyed Mohammad Asghari , Benjamin Van Roy , Nat McAleese , John Aslanides , Geoffrey Irving

Robust generalization is essential for deploying deep learning based tumor segmentation in clinical PET-CT workflows, where anatomical sites, scanners, and patient populations vary widely. This study presents the first cross cancer…

Recently, pre-trained language models (LMs) have achieved strong performance when fine-tuned on difficult benchmarks like SuperGLUE. However, performance can suffer when there are very few labeled examples available for fine-tuning. Pattern…

计算与语言 · 计算机科学 2021-09-29 Derek Tam , Rakesh R Menon , Mohit Bansal , Shashank Srivastava , Colin Raffel

There has been growing research interest in using deep learning based method to achieve fully automated segmentation of lesion in Positron emission tomography computed tomography(PET CT) scans for the prognosis of various cancers. Recent…

图像与视频处理 · 电气工程与系统科学 2022-09-19 Jia Zhang , Yukun Huang , Zheng Zhang , Yuhang Shi

Despite the growing success of Convolution neural networks (CNN) in the recent past in the task of scene segmentation, the standard models lack some of the important features that might result in sub-optimal segmentation outputs. The widely…

计算机视觉与模式识别 · 计算机科学 2020-09-16 Soham Chattopadhyay , Hritam Basak

MixUp is a computer vision data augmentation technique that uses convex interpolations of input data and their labels to enhance model generalization during training. However, the application of MixUp to the natural language understanding…

计算与语言 · 计算机科学 2021-02-24 Wancong Zhang , Ieshan Vaidya

Lesion Segmentation in PET/CT scans is an essential part of modern oncological workflows. To address the challenges of time-intensive manual annotation and high inter-observer variability, the autoPET challenge series seeks to advance…

图像与视频处理 · 电气工程与系统科学 2025-09-03 Junwei Huang , Yingqi Hao , Yitong Luo , Ziyu Wang , Mingxuan Liu , Yifei Chen , Yuanhan Wang , Lei Xiang , Qiyuan Tian
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