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Research in several fields now requires the analysis of data sets in which multiple high-dimensional types of data are available for a common set of objects. In particular, The Cancer Genome Atlas (TCGA) includes data from several diverse…

机器学习 · 统计学 2013-05-29 Eric F. Lock , Katherine A. Hoadley , J. S. Marron , Andrew B. Nobel

In modern medical diagnostics, magnetic resonance imaging (MRI) is an important technique that provides detailed insights into anatomical structures. In this paper, we present a comprehensive methodology focusing on streamlining the…

图像与视频处理 · 电气工程与系统科学 2024-04-25 Siddharth Jha , Zichen Gui , Benjamin Delbos , Richard Moreau , Arnaud Leleve , Irene Cheng

We propose a new method to visualize gene expression experiments inspired by the latent semantic indexing, technique originally proposed in the textual analysis context. By using the correspondence word-gene document-experiment, we define…

应用统计 · 统计学 2015-04-08 Javier González , Alberto Muñoz , Gabriel Martos

For the Bio+Med-Vis Challenge 2024, we propose a visual analytics system as a redesign for the scatter pie chart visualization of cell type proportions of spatial transcriptomics data. Our design uses three linked views: a view of the…

人机交互 · 计算机科学 2024-09-12 David Hägele , Yuxuan Tang , Daniel Weiskopf

Manual Pap smear analysis for cervical cancer screening is limited by inter-observer variability, time constraints, and restricted expert availability. Although convolutional neural networks (CNNs) have automated cervical cell…

计算机视觉与模式识别 · 计算机科学 2026-05-19 Nisreen Albzour , Sarah S. Lam

Reliable classification and detection of certain medical conditions, in images, with state-of-the-art semantic segmentation networks, require vast amounts of pixel-wise annotation. However, the public availability of such datasets is…

计算机视觉与模式识别 · 计算机科学 2023-03-17 Erik Ostrowski , Bharath Srinivas Prabakaran , Muhammad Shafique

Real-world machine learning models require rigorous evaluation before deployment, especially in safety-critical domains like autonomous driving and surveillance. The evaluation of machine learning models often focuses on data slices, which…

计算机视觉与模式识别 · 计算机科学 2025-05-07 Xinyuan Yan , Xiwei Xuan , Jorge Piazentin Ono , Jiajing Guo , Vikram Mohanty , Shekar Arvind Kumar , Liang Gou , Bei Wang , Liu Ren

Risk stratification is a key tool in clinical decision-making, yet current approaches often fail to translate sophisticated survival analysis into actionable clinical criteria. We present a novel method for unsupervised machine learning…

Decision trees are flexible prediction models which are constructed to quantify outcome-covariate relationships and characterize relevant population subgroups. However, the standard graphical representation of fitted decision trees…

应用统计 · 统计学 2021-03-09 Ashwini Venkatasubramaniam , Julian Wolfson

Protein-protein interaction networks (PPIN) enable the study of cellular processes in organisms. Visualizing PPINs in extended reality (XR), including virtual reality (VR) and mixed reality (MR), is crucial for exploring subnetworks,…

多媒体 · 计算机科学 2024-02-07 Busra Senderin , Nurcan Tuncbag , Elif Surer

The increased availability of the multi-view data (data on the same samples from multiple sources) has led to strong interest in models based on low-rank matrix factorizations. These models represent each data view via shared and individual…

机器学习 · 统计学 2021-04-01 Irina Gaynanova , Gen Li

Segmentation models can recognize a pre-defined set of objects in images. However, models that can reason over complex user queries that implicitly refer to multiple objects of interest are still in their infancy. Recent advances in…

人工智能 · 计算机科学 2025-05-06 Jerome Quenum , Wen-Han Hsieh , Tsung-Han Wu , Ritwik Gupta , Trevor Darrell , David M. Chan

Large vision and language models learned directly through image-text associations often lack detailed visual substantiation, whereas image segmentation tasks are treated separately from recognition, supervisedly learned without…

计算机视觉与模式识别 · 计算机科学 2024-05-06 Tsung-Wei Ke , Sangwoo Mo , Stella X. Yu

This paper proposes a visual analytics framework that addresses the complex user interactions required through a command-line interface to run analyses in distributed data analysis systems. The visual analytics framework facilitates the…

Explainable Artificial Intelligence (XAI) has gained importance in interpreting model predictions. Among leading techniques for XAI, Local Interpretable Model-agnostic Explanations (LIME) is most frequently utilized as it notably helps…

人机交互 · 计算机科学 2026-02-05 Jeongmin Rhee , Changhee Lee , DongHwa Shin , Bohyoung Kim

Virtual Screening (VS) of vast compound libraries guided by Artificial Intelligence (AI) models is a highly productive approach to early drug discovery. Data splitting is crucial for better benchmarking of such AI models. Traditional random…

定量方法 · 定量生物学 2024-07-02 Qianrong Guo , Saiveth Hernandez-Hernandez , Pedro J Ballester

Matching cross-view images is challenging because the appearance and viewpoints are significantly different. While low-level features based on gradient orientations or filter responses can drastically vary with such changes in viewpoint,…

计算机视觉与模式识别 · 计算机科学 2015-11-03 Francesco Castaldo , Amir Zamir , Roland Angst , Francesco Palmieri , Silvio Savarese

Quantitative cancer image analysis relies on the accurate delineation of tumours, a very specialised and time-consuming task. For this reason, methods for automated segmentation of tumours in medical imaging have been extensively developed…

图像与视频处理 · 电气工程与系统科学 2022-12-07 Saúl Alonso-Monsalve , Leigh H. Whitehead , Adam Aurisano , Lorena Escudero Sanchez

Accurate segmentation and classification of brain tumors from Magnetic Resonance Imaging (MRI) remain key challenges in medical image analysis, primarily due to the lack of high-quality, balanced, and diverse datasets with expert…

图像与视频处理 · 电气工程与系统科学 2026-01-29 Amirreza Fateh , Yasin Rezvani , Sara Moayedi , Sadjad Rezvani , Fatemeh Fateh , Mansoor Fateh , Vahid Abolghasemi

Artificial Intelligence (AI) has the potential to revolutionize diagnosis and segmentation in medical imaging. However, development and clinical implementation face multiple challenges including limited data availability, lack of…

图像与视频处理 · 电气工程与系统科学 2025-01-22 Zelong Liu , Andrew Tieu , Nikhil Patel , Georgios Soultanidis , Louisa Deyer , Ying Wang , Sean Huver , Alexander Zhou , Yunhao Mei , Zahi A. Fayad , Timothy Deyer , Xueyan Mei