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New biological assays like Perturb-seq link highly parallel CRISPR interventions to a high-dimensional transcriptomic readout, providing insight into gene regulatory networks. Causal gene regulatory networks can be represented by directed…

机器学习 · 统计学 2024-02-22 Albert Xue , Jingyou Rao , Sriram Sankararaman , Harold Pimentel

Joint diagonalization, the process of finding a shared set of approximate eigenvectors for a collection of matrices, arises in diverse applications such as multidimensional harmonic analysis or quantum information theory. This task is…

最优化与控制 · 数学 2025-02-12 Erik Troedsson , Marcus Carlsson , Herwig Wendt

The Intrinsic Dimension (ID) is a key concept in unsupervised learning and feature selection, as it is a lower bound to the number of variables which are necessary to describe a system. However, in almost any real-world dataset the ID…

机器学习 · 统计学 2026-04-02 Antonio Di Noia , Iuri Macocco , Aldo Glielmo , Alessandro Laio , Antonietta Mira

In this paper, we derive optimality results for greedy Bayesian-network search algorithms that perform single-edge modifications at each step and use asymptotically consistent scoring criteria. Our results extend those of Meek (1997) and…

人工智能 · 计算机科学 2013-01-07 David Maxwell Chickering , Christopher Meek

Bayesian networks are probabilistic graphical models widely employed to understand dependencies in high dimensional data, and even to facilitate causal discovery. Learning the underlying network structure, which is encoded as a directed…

机器学习 · 统计学 2022-02-03 Jack Kuipers , Polina Suter , Giusi Moffa

Finding the parameters of a latent variable causal model is central to causal inference and causal identification. In this article, we show that existing graphical structures that are used in causal inference are not stable under…

机器学习 · 统计学 2025-10-03 Mehrzad Saremi

Learning the structure of a Bayesian Network (BN) with score-based solutions involves exploring the search space of possible graphs and moving towards the graph that maximises a given objective function. Some algorithms offer exact…

机器学习 · 计算机科学 2022-05-03 Anthony C. Constantinou , Yang Liu , Neville K. Kitson , Kiattikun Chobtham , Zhigao Guo

Learning a good distance metric in feature space potentially improves the performance of the KNN classifier and is useful in many real-world applications. Many metric learning algorithms are however based on the point estimation of a…

计算机视觉与模式识别 · 计算机科学 2016-04-11 Dong Wang , Xiaoyang Tan

Recent advances in computationally efficient non-myopic Bayesian optimization (BO) improve query efficiency over traditional myopic methods like expected improvement while only modestly increasing computational cost. These advances have…

机器学习 · 统计学 2021-12-07 Yunxiang Zhang , Xiangyu Zhang , Peter I. Frazier

Scheduling job flows efficiently and rapidly on distributed computing clusters is one of huge challenges for daily operation of data centers. In a practical scenario, a single job consists of numerous stages with complex dependency relation…

分布式、并行与集群计算 · 计算机科学 2022-02-22 Jinhong Luo , Yunfan Zhou , Xijun Li , Mingxuan Yuan , Jianguo Yao , Jia Zeng

We present a derivative-based algorithm for nonlinearly constrained optimization problems that is tolerant of inaccuracies in the data. The algorithm solves a semi-smooth set of nonlinear equations that are equivalent to the first-order…

最优化与控制 · 数学 2017-09-21 Jason E. Hicken , Pengfei Meng , Alp Dener

Proper optimization of deep neural networks is an open research question since an optimal procedure to change the learning rate throughout training is still unknown. Manually defining a learning rate schedule involves troublesome…

机器学习 · 计算机科学 2021-02-18 David Macêdo , Pedro Dreyer , Teresa Ludermir , Cleber Zanchettin

Modeling the associations between real world entities from their multivariate cross-sectional profiles can provide cues into the concerted working of these entities as a system. Several techniques have been proposed for deciphering these…

机器学习 · 计算机科学 2025-01-07 Radha Nagarajan , Marco Scutari

Finding a globally optimal Bayesian Network using exhaustive search is a problem with super-exponential complexity, which severely restricts the number of variables that it can work for. We implement a dynamic programming based algorithm…

人工智能 · 计算机科学 2022-07-19 Nand Sharma , Joshua Millstein

Using quasi-Newton methods in stochastic optimization is not a trivial task given the difficulty of extracting curvature information from the noisy gradients. Moreover, pre-conditioning noisy gradient observations tend to amplify the noise.…

最优化与控制 · 数学 2024-04-02 Andre Carlon , Luis Espath , Raul Tempone

We present a method for learning the parameters of a Bayesian network with prior knowledge about the signs of influences between variables. Our method accommodates not just the standard signs, but provides for context-specific signs as…

人工智能 · 计算机科学 2012-07-09 Ad Feelders , Linda C. van der Gaag

We present a novel hybrid algorithm for Bayesian network structure learning, called H2PC. It first reconstructs the skeleton of a Bayesian network and then performs a Bayesian-scoring greedy hill-climbing search to orient the edges. The…

机器学习 · 统计学 2015-06-19 Maxime Gasse , Alex Aussem , Haytham Elghazel

Bayesian network is a frequently-used method for fault detection and diagnosis in industrial processes. The basis of Bayesian network is structure learning which learns a directed acyclic graph (DAG) from data. However, the search space…

人工智能 · 计算机科学 2023-02-07 Zhichao Chen , Zhiqiang Ge

Optimization in machine learning, both theoretical and applied, is presently dominated by first-order gradient methods such as stochastic gradient descent. Second-order optimization methods, that involve second derivatives and/or second…

机器学习 · 计算机科学 2021-03-08 Rohan Anil , Vineet Gupta , Tomer Koren , Kevin Regan , Yoram Singer

Learning the structure of dependencies among multiple random variables is a problem of considerable theoretical and practical interest. Within the context of Bayesian Networks, a practical and surprisingly successful solution to this…

机器学习 · 计算机科学 2021-01-20 Giulio Caravagna , Daniele Ramazzotti