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Bi-clustering is a useful approach in analyzing biological data when observations come from heterogeneous groups and have a large number of features. We outline a general Bayesian approach in tackling bi-clustering problems in moderate to…

应用统计 · 统计学 2021-02-11 Han Yan , Jiexing Wu , Yang Li , Jun S. Liu

Neurons can display highly variable dynamics. While such variability presumably supports the wide range of behaviors generated by the organism, their gene expressions are relatively stable in the adult brain. This suggests that neuronal…

神经元与认知 · 定量生物学 2023-11-07 Lu Mi , Trung Le , Tianxing He , Eli Shlizerman , Uygar Sümbül

Humans can fluidly adapt their interest in complex environments in ways that machines cannot. Here, we lay the groundwork for a real-world system that passively monitors and merges neural correlates of visual interest across team members…

神经元与认知 · 定量生物学 2019-01-21 Amelia J. Solon , Stephen M. Gordon , Jonathan R. McDaniel , Vernon J. Lawhern

Understanding how the human brain encodes and processes external visual stimuli has been a fundamental challenge in neuroscience. With advancements in artificial intelligence, sophisticated visual decoding architectures have achieved…

人机交互 · 计算机科学 2025-07-22 Jiahua Tang , Song Wang , Jiachen Zou , Chen Wei , Quanying Liu

A primary challenge in utilizing in-vitro biological neural networks for computations is finding good encoding and decoding schemes for inputting and decoding data to and from the networks. Furthermore, identifying the optimal parameter…

神经元与认知 · 定量生物学 2024-04-18 Trym A. E. Lindell , Ola H. Ramstad , Ionna Sandvig , Axel Sandvig , Stefano Nichele

Classification of whole-brain functional connectivity MRI data with convolutional neural networks (CNNs) has shown promise, but the complexity of these models impedes understanding of which aspects of brain activity contribute to…

神经元与认知 · 定量生物学 2020-05-28 Matthew Leming , John Suckling

Neural decoding, a critical component of Brain-Computer Interface (BCI), has recently attracted increasing research interest. Previous research has focused on leveraging signal processing and deep learning methods to enhance neural decoding…

神经元与认知 · 定量生物学 2025-12-11 Gaorui Zhang , Zhizhang Yuan , Jialan Yang , Junru Chen , Li Meng , Yang Yang

Deep learning has made significant advances in creating efficient representations of time series data by automatically identifying complex patterns. However, these approaches lack interpretability, as the time series is transformed into a…

机器学习 · 计算机科学 2023-10-26 Etienne Le Naour , Ghislain Agoua , Nicolas Baskiotis , Vincent Guigue

Transformer models have become state-of-the-art in decoding stimuli and behavior from neural activity, significantly advancing neuroscience research. Yet greater transparency in their decision-making processes would substantially enhance…

定量方法 · 定量生物学 2025-06-18 Laurence Freeman , Philip Shamash , Vinam Arora , Caswell Barry , Tiago Branco , Eva Dyer

Brain-computer interfaces (BCIs) make possible to interact with the external environment by decoding the mental intention of individuals. BCIs can therefore be used to address basic neuroscience questions but also to unlock a variety of…

Sensory inference under conditions of uncertainty is a major problem in both machine learning and computational neuroscience. An important but poorly understood aspect of sensory processing is the role of active sensing. Here, we present a…

人工智能 · 计算机科学 2014-08-12 Sheeraz Ahmad , Angela Yu

Sensory inference under conditions of uncertainty is a major problem in both machine learning and computational neuroscience. An important but poorly understood aspect of sensory processing is the role of active sensing. Here, we present a…

人工智能 · 计算机科学 2013-05-30 Sheeraz Ahmad , Angela J. Yu

Neural decoding, the process of understanding how brain activity corresponds to different stimuli, has been a primary objective in cognitive sciences. Over the past three decades, advances in functional Magnetic Resonance Imaging (fMRI) and…

计算机视觉与模式识别 · 计算机科学 2026-01-28 Yanchen Wang , Adam Turnbull , Tiange Xiang , Yunlong Xu , Sa Zhou , Adnan Masoud , Shekoofeh Azizi , Feng Vankee Lin , Ehsan Adeli

Solving systems of Boolean equations is a fundamental task in symbolic computation and algebraic cryptanalysis, with wide-ranging applications in cryptography, coding theory, and formal verification. Among existing approaches, the Boolean…

密码学与安全 · 计算机科学 2026-04-21 Minzhong Luo , Yudong Sun , Yin Long

Pre-trained models operating directly on raw bytes have achieved promising performance in encrypted network traffic classification (NTC), but often suffer from shortcut learning-relying on spurious correlations that fail to generalize to…

机器学习 · 计算机科学 2026-01-16 Chuyi Wang , Xiaohui Xie , Tongze Wang , Yong Cui

Deep learning frameworks have become increasingly popular in brain computer interface (BCI) study thanks to their outstanding performance. However, in terms of the classification model alone, they are treated as black box as they do not…

神经与进化计算 · 计算机科学 2021-12-15 Ji-Seon Bang , Seong-Whan Lee

We present a workflow for clinical data analysis that relies on Bayesian Structure Learning (BSL), an unsupervised learning approach, robust to noise and biases, that allows to incorporate prior medical knowledge into the learning process…

机器学习 · 计算机科学 2022-10-12 Elisa Ferrari , Luna Gargani , Greta Barbieri , Lorenzo Ghiadoni , Francesco Faita , Davide Bacciu

Brain-computer interfaces (BCIs) hold great potential for aiding individuals with speech impairments. Utilizing electroencephalography (EEG) to decode speech is particularly promising due to its non-invasive nature. However, recordings are…

神经元与认知 · 定量生物学 2024-07-11 Motoshige Sato , Kenichi Tomeoka , Ilya Horiguchi , Kai Arulkumaran , Ryota Kanai , Shuntaro Sasai

Modern well-performing approaches to neural decoding are based on machine learning models such as decision tree ensembles and deep neural networks. The wide range of algorithms that can be utilized to learn from neural spike trains, which…

神经元与认知 · 定量生物学 2023-01-30 Ivan Lazarevich , Ilya Prokin , Boris Gutkin , Victor Kazantsev

Language model based text-to-speech (TTS) models, like VALL-E, have gained attention for their outstanding in-context learning capability in zero-shot scenarios. Neural speech codec is a critical component of these models, which can convert…

声音 · 计算机科学 2024-03-12 Yong Ren , Tao Wang , Jiangyan Yi , Le Xu , Jianhua Tao , Chuyuan Zhang , Junzuo Zhou