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In silico drug-target interaction (DTI) prediction is an important and challenging problem in biomedical research with a huge potential benefit to the pharmaceutical industry and patients. Most existing methods for DTI prediction including…

机器学习 · 计算机科学 2019-08-22 Qingyuan Feng , Evgenia Dueva , Artem Cherkasov , Martin Ester

We propose a recurrent neural network for a "model-free" simulation of a dynamical system with unknown parameters without prior knowledge. The deep learning model aims to jointly learn the nonlinear time marching operator and the effects of…

机器学习 · 计算机科学 2021-03-01 Kyongmin Yeo , Dylan E. C. Grullon , Fan-Keng Sun , Duane S. Boning , Jayant R. Kalagnanam

Deformable medical image registration is a fundamental task in medical image analysis. While deep learning-based methods have demonstrated superior accuracy and computational efficiency compared to traditional techniques, they often…

计算机视觉与模式识别 · 计算机科学 2025-10-23 Ahsan Raza Siyal , Markus Haltmeier , Ruth Steiger , Malik Galijasevic , Elke Ruth Gizewski , Astrid Ellen Grams

One of the major obstacles in designing an automatic target recognition (ATR) algorithm, is that there are often labeled images in one domain (i.e., infrared source domain) but no annotated images in the other target domains (i.e., visible,…

计算机视觉与模式识别 · 计算机科学 2023-05-24 Shoaib M. Sami , Nasser M. Nasrabadi , Raghuveer Rao

When fine-tuning Deep Neural Networks (DNNs) to new data, DNNs are prone to overwriting network parameters required for task-specific functionality on previously learned tasks, resulting in a loss of performance on those tasks. We propose…

机器学习 · 计算机科学 2025-01-22 Christopher Angelini , Nidhal Bouaynaya

Fractional anisotropy (FA) and directionally encoded colour (DEC) maps are essential for evaluating white matter integrity and structural connectivity in neuroimaging. However, the spatial misalignment between FA maps and tractography…

计算机视觉与模式识别 · 计算机科学 2025-05-07 Xin Du , Francesca M. Cozzi , Rajesh Jena

Compressed Sensing MRI (CS-MRI) has provided theoretical foundations upon which the time-consuming MRI acquisition process can be accelerated. However, it primarily relies on iterative numerical solvers which still hinders their adaptation…

计算机视觉与模式识别 · 计算机科学 2018-06-12 Tran Minh Quan , Thanh Nguyen-Duc , Won-Ki Jeong

In the realm of practical fine-grained visual classification applications rooted in deep learning, a common scenario involves training a model using a pre-existing dataset. Subsequently, a new dataset becomes available, prompting the desire…

计算机视觉与模式识别 · 计算机科学 2024-05-10 Zheming Zuo , Joseph Smith , Jonathan Stonehouse , Boguslaw Obara

Neural audio super-resolution models are typically trained on low- and high-resolution audio signal pairs. Although these methods achieve highly accurate super-resolution if the acoustic characteristics of the input data are similar to…

音频与语音处理 · 电气工程与系统科学 2023-02-28 Reo Yoneyama , Ryuichi Yamamoto , Kentaro Tachibana

Dynamic positron emission tomography imaging (dPET) provides temporally resolved images of a tracer enabling a quantitative measure of physiological processes. Voxel-wise physiologically-based pharmacokinetic (PBPK) modeling of the time…

图像与视频处理 · 电气工程与系统科学 2023-05-19 Francesca De Benetti , Walter Simson , Magdalini Paschali , Hasan Sari , Axel Romiger , Kuangyu Shi , Nassir Navab , Thomas Wendler

Recommender systems have recently attracted many researchers in the deep learning community. The state-of-the-art deep neural network models used in recommender systems are typically multilayer perceptron and deep Autoencoder (DAE), among…

信息检索 · 计算机科学 2019-01-03 Dai Hoang Tran , Zawar Hussain , Wei Emma Zhang , Nguyen Lu Dang Khoa , Nguyen H. Tran , Quan Z. Sheng

Head-based signals such as EEG, EMG, EOG, and ECG collected by wearable systems will play a pivotal role in clinical diagnosis, monitoring, and treatment of important brain disorder diseases. However, the real-time transmission of the…

Dynamical modeling of multisite human intracranial neural recordings is essential for developing neurotechnologies such as brain-computer interfaces (BCIs). Linear dynamical models are widely used for this purpose due to their…

The recent direction of unpaired image-to-image translation is on one hand very exciting as it alleviates the big burden in obtaining label-intensive pixel-to-pixel supervision, but it is on the other hand not fully satisfactory due to the…

计算机视觉与模式识别 · 计算机科学 2019-02-27 Rui Zhang , Tomas Pfister , Jia Li

Multisequence Magnetic Resonance Imaging (MRI) provides a more reliable diagnosis in clinical applications through complementary information across sequences. However, in practice, the absence of certain MR sequences is a common problem…

图像与视频处理 · 电气工程与系统科学 2025-10-21 Jihoon Cho , Jonghye Woo , Jinah Park

Medical image segmentation is routinely performed to isolate regions of interest, such as organs and lesions. Currently, deep learning is the state of the art for automatic segmentation, but is usually limited by the need for supervised…

图像与视频处理 · 电气工程与系统科学 2021-02-05 Umaseh Sivanesan , Luis H. Braga , Ranil R. Sonnadara , Kiret Dhindsa

Quantitative analysis of cell structures is essential for biomedical and pharmaceutical research. The standard imaging approach relies on fluorescence microscopy, where cell structures of interest are labeled by chemical staining…

Dynamic Contrast Enhanced-Magnetic Resonance Imaging (DCE-MRI) is widely used to complement ultrasound examinations and x-ray mammography during the early detection and diagnosis of breast cancer. However, images generated by various MRI…

图像与视频处理 · 电气工程与系统科学 2021-06-18 Gourav Modanwal , Adithya Vellal , Maciej A. Mazurowski

Given the crucial role of microtubules for cell survival, many researchers have found success using microtubule-targeting agents in the search for effective cancer therapeutics. Understanding microtubule responses to targeted interventions…

图像与视频处理 · 电气工程与系统科学 2019-10-03 Hao-Chih Lee , Sarah T Cherng , Riccardo Miotto , Joel T Dudley

Generalization is one of the main challenges of computational pathology. Slide preparation heterogeneity and the diversity of scanners lead to poor model performance when used on data from medical centers not seen during training. In order…

图像与视频处理 · 电气工程与系统科学 2024-01-09 Nicolas Nerrienet , Rémy Peyret , Marie Sockeel , Stéphane Sockeel