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The processing of entities in natural language is essential to many medical NLP systems. Unfortunately, existing datasets vastly under-represent the entities required to model public health relevant texts such as health advice often found…

计算与语言 · 计算机科学 2022-10-10 Joseph Gatto , Parker Seegmiller , Garrett Johnston , Sarah M. Preum

Recently, deep learning-based beamforming algorithms have shown promising performance in target speech extraction tasks. However, most systems do not fully utilize spatial information. In this paper, we propose a target speech extraction…

声音 · 计算机科学 2023-06-29 Aoqi Guo , Junnan Wu , Peng Gao , Wenbo Zhu , Qinwen Guo , Dazhi Gao , Yujun Wang

Vision-language models hold considerable promise for ophthalmology, but their development depends on large-scale, high-quality image-text datasets that remain scarce. We present PubMed-Ophtha, a hierarchical dataset of 102,023…

计算机视觉与模式识别 · 计算机科学 2026-05-05 Verena Jasmin Hallitschke , Carsten Eickhoff , Philipp Berens

Spatial transcriptomics assays are rapidly increasing in scale and complexity, making computational analysis a major bottleneck in biological discovery. Although frontier AI agents have improved dramatically at software engineering and…

人工智能 · 计算机科学 2026-01-06 Kenny Workman , Zhen Yang , Harihara Muralidharan , Hannah Le

Clinical notes contain an abundance of important but not-readily accessible information about patients. Systems to automatically extract this information rely on large amounts of training data for which their exists limited resources to…

计算与语言 · 计算机科学 2020-04-23 Andriy Mulyar , Bridget T. McInnes

Extracting structured knowledge from unstructured data still faces practical limitations: entity and event extraction pipelines remain brittle, knowledge graph construction requires costly ontology engineering, and cross-domain…

数据库 · 计算机科学 2026-04-13 Wenxiao Zhang , Yu Liu , Qiang sun , Yihao Ding , Sirui Li , Yanbing Liu , Jin B. Hong , Wei Liu

Information Extraction is a well-researched area of Natural Language Processing with applications in web search and question answering concerned with identifying entities and relationships between them as expressed in a given context,…

信息检索 · 计算机科学 2020-11-17 Erin Macdonald , Denilson Barbosa

Image mass cytometry (IMC) enables high-dimensional spatial profiling by combining mass cytometry's analytical power with spatial distributions of cell phenotypes. Recent studies leverage large language models (LLMs) to extract cell states…

计算与语言 · 计算机科学 2025-06-03 Chi-Jane Chen , Yuhang Chen , Sukwon Yun , Natalie Stanley , Tianlong Chen

Objectives: Precise segmentation of total extraocular muscles (EOM) and optic nerve (ON) is essential to assess anatomical development and progression of thyroid-associated ophthalmopathy (TAO). We aim to develop a semantic segmentation…

This work proposes a neural network to extensively exploit spatial information for multichannel joint speech separation, denoising and dereverberation, named SpatialNet. In the short-time Fourier transform (STFT) domain, the proposed…

声音 · 计算机科学 2023-12-25 Changsheng Quan , Xiaofei Li

Electronic health records (EHRs) form an invaluable resource for training clinical decision support systems. To leverage the potential of such systems in high-risk applications, we need large, structured tabular datasets on which we can…

人工智能 · 计算机科学 2025-11-24 Paloma Rabaey , Adrick Tench , Stefan Heytens , Thomas Demeester

Models of neural networks have proven their utility in the development of learning algorithms in computer science and in the theoretical study of brain dynamics in computational neuroscience. We propose in this paper a spatial neural…

神经与进化计算 · 计算机科学 2014-05-06 Lucas Antiqueira , Liang Zhao

We propose InsightNet, a novel approach for the automated extraction of structured insights from customer reviews. Our end-to-end machine learning framework is designed to overcome the limitations of current solutions, including the absence…

Robotic task planning in real-world environments requires not only object recognition but also a nuanced understanding of spatial relationships between objects. We present a spatial-relationship-aware dataset of nearly 1,000 robot-acquired…

机器人学 · 计算机科学 2025-06-17 Peng Wang , Minh Huy Pham , Zhihao Guo , Wei Zhou

The development of medical vision-language foundation models has attracted significant attention in the field of medicine and healthcare due to their promising prospect in various clinical applications. While previous studies have commonly…

计算机视觉与模式识别 · 计算机科学 2024-02-27 Weijian Huang , Cheng Li , Hong-Yu Zhou , Jiarun Liu , Hao Yang , Yong Liang , Guangming Shi , Hairong Zheng , Shanshan Wang

Despite diverse efforts to mine various modalities of medical data, the conversations between physicians and patients at the time of care remain an untapped source of insights. In this paper, we leverage this data to extract structured…

机器学习 · 计算机科学 2020-07-15 Kundan Krishna , Amy Pavel , Benjamin Schloss , Jeffrey P. Bigham , Zachary C. Lipton

The wide adoption of electronic health records (EHRs) has enabled a wide range of applications leveraging EHR data. However, the meaningful use of EHR data largely depends on our ability to efficiently extract and consolidate information…

信息检索 · 计算机科学 2018-08-29 Yanshan Wang , Naveed Afzal , Sunyang Fu , Liwei Wang , Feichen Shen , Majid Rastegar-Mojarad , Hongfang Liu

There is growing interest in incorporating eye-tracking data and other implicit measures of human language processing into natural language processing (NLP) pipelines. The data from human language processing contain unique insight into…

计算与语言 · 计算机科学 2023-10-24 Karin de Langis , Dongyeop Kang

Segmentation is a fundamental task in medical image analysis. However, most existing methods focus on primary region extraction and ignore edge information, which is useful for obtaining accurate segmentation. In this paper, we propose a…

计算机视觉与模式识别 · 计算机科学 2019-07-26 Zhijie Zhang , Huazhu Fu , Hang Dai , Jianbing Shen , Yanwei Pang , Ling Shao

Information Extraction (IE) for semi-structured document images is often approached as a sequence tagging problem by classifying each recognized input token into one of the IOB (Inside, Outside, and Beginning) categories. However, such…

计算与语言 · 计算机科学 2021-07-02 Wonseok Hwang , Jinyeong Yim , Seunghyun Park , Sohee Yang , Minjoon Seo