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We present a novel parallelization strategy for evaluating Finite Element Method (FEM) variational forms on GPUs, focusing on those that are expressible through the Unified Form Language (UFL) on simplex meshes. We base our approach on code…

分布式、并行与集群计算 · 计算机科学 2025-06-24 Kaushik Kulkarni , Andreas Klöckner

We present an algorithm for tests generation tools based on symbolic execution. The algorithm is supposed to help in situations, when a tool is repeatedly failing to cover some code by tests. The algorithm then provides the tool a necessary…

符号计算 · 计算机科学 2011-12-21 Marek Trtík

C/C++/OpenCL-based high-level synthesis (HLS) becomes more and more popular for field-programmable gate array (FPGA) accelerators in many application domains in recent years, thanks to its competitive quality of results (QoR) and short…

硬件体系结构 · 计算机科学 2021-05-07 Yuze Chi , Licheng Guo , Jason Lau , Young-kyu Choi , Jie Wang , Jason Cong

GPU runtimes are historically implemented in CUDA or other vendor specific languages dedicated to GPU programming. In this work we show that OpenMP 5.1, with minor compiler extensions, is capable of replacing existing solutions without a…

分布式、并行与集群计算 · 计算机科学 2021-10-06 Shilei Tian , Jon Chesterfield , Johannes Doerfert , Barbara Chapman

GPU (graphics processing unit) has been used for many data-intensive applications. Among them, deep learning systems are one of the most important consumer systems for GPU nowadays. As deep learning applications impose deeper and larger…

分布式、并行与集群计算 · 计算机科学 2019-03-18 Junzhe Zhang , Sai Ho Yeung , Yao Shu , Bingsheng He , Wei Wang

Large-scale simulations of plasmas are essential for advancing our understanding of fusion devices, space, and astrophysical systems. Particle-in-Cell (PIC) codes have demonstrated their success in simulating numerous plasma phenomena on…

分布式、并行与集群计算 · 计算机科学 2021-07-05 Steven W. D. Chien , Jonas Nylund , Gabriel Bengtsson , Ivy B. Peng , Artur Podobas , Stefano Markidis

We have developed a symbolic algebra approach to automatically produce, verify, and optimize computer code for the Fast Multipole Method (FMM) operators. This approach allows for flexibility in choosing a basis set and kernel, and can…

计算物理 · 物理学 2020-05-29 Jonathan P. Coles , Rebekka Bieri

In this paper, we develop a new parallel auxiliary grid algebraic multigrid (AMG) method to leverage the power of graphic processing units (GPUs). In the construction of the hierarchical coarse grid, we use a simple and fixed coarsening…

数值分析 · 数学 2012-12-07 Lu Wang , Xiaozhe Hu , Jonathan Cohen , Jinchao Xu

High-throughput structure-based screening of drug-like molecules has become a common tool in biomedical research. Recently, acceleration with graphics processing units (GPUs) has provided a large performance boost for molecular docking…

分布式、并行与集群计算 · 计算机科学 2022-03-07 Mathialakan Thavappiragasam , Wael Elwasif , Ada Sedova

With the use of belief propagation (BP) decoding algorithm, low-density parity-check (LDPC) codes can achieve near-Shannon limit performance. In order to evaluate the error performance of LDPC codes, simulators running on CPUs are commonly…

信息论 · 计算机科学 2012-07-30 Yue Zhao , Francis C. M. Lau

Dynamic programming (DP) is a cornerstone of combinatorial optimization, yet its inherently sequential structure has long limited its scalability in scenario-based stochastic programming (SP). This paper introduces a GPU-accelerated…

最优化与控制 · 数学 2025-11-25 Jingyi Zhao , Linxin Yang , Haohua Zhang , Tian Ding

Legacy codes are in ubiquitous use in scientific simulations; they are well-tested and there is significant time investment in their use. However, one challenge is the adoption of new, sometimes incompatible computing paradigms, such as GPU…

分布式、并行与集群计算 · 计算机科学 2025-09-11 Nicolas Nytko , Andrew Reisner , J. David Moulton , Luke N. Olson , Matthew West

This paper presents a methodology for using LLVM-based tools to tune the DCA++ (dynamical clusterapproximation) application that targets the new ARM A64FX processor. The goal is to describethe changes required for the new architecture and…

分布式、并行与集群计算 · 计算机科学 2021-06-29 Joseph Huber , Weile Wei , Giorgis Georgakoudis , Johannes Doerfert , Oscar Hernandez

As fusion energy devices advance, plasma simulations are crucial for reactor design. Our work extends BIT1 hybrid parallelization by integrating MPI with OpenMP and OpenACC, focusing on asynchronous multi-GPU programming. Results show…

Modern Graphics Processing Units (GPUs) are well provisioned to support the concurrent execution of thousands of threads. Unfortunately, different bottlenecks during execution and heterogeneous application requirements create imbalances in…

Analyzing the behavior of a program running on a processor that supports speculative execution is crucial for applications such as execution time estimation and side channel detection. Unfortunately, existing static analysis techniques…

编程语言 · 计算机科学 2019-08-16 Meng Wu , Chao Wang

Hybrid computational architectures based on the joint power of Central Processing Units and Graphic Processing Units (GPUs) are becoming popular and powerful hardware tools for a wide range of simulations in biology, chemistry, engineering,…

天体物理仪器与方法 · 物理学 2015-06-15 Roberto Capuzzo-Dolcetta , Mario Spera

We develop a highly optimized code for simulating the Edwards-Anderson Heisenberg model on graphics processing units (GPUs). Using a number of computational tricks such as tiling, data compression and appropriate memory layouts, the…

计算物理 · 物理学 2012-08-30 Taras Yavors'kii , Martin Weigel

The Particle-In-Cell (PIC) method is a computational technique widely used in plasma physics to model plasmas at the kinetic level. In this work, we present our effort to prepare the semi-implicit energy-conserving PIC code ECsim for…

A high fidelity flow simulation for complex geometries for high Reynolds number ($Re$) flow is still very challenging, which requires more powerful computational capability of HPC system. However, the development of HPC with traditional CPU…

计算物理 · 物理学 2022-03-03 Chuangchao Ye , Pengjunyi Zhang , Rui Yan , Dejun Sun , Zhenhua Wan