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Clinical Named Entity Recognition (CNER) aims to identify and classify clinical terms such as diseases, symptoms, treatments, exams, and body parts in electronic health records, which is a fundamental and crucial task for clinical and…

计算与语言 · 计算机科学 2018-04-16 Qi Wang , Yuhang Xia , Yangming Zhou , Tong Ruan , Daqi Gao , Ping He

Citation count of a paper is a commonly used proxy for evaluating the significance of a paper in the scientific community. Yet citation measures are widely criticized for failing to accurately reflect the true impact of a paper. Thus, we…

计算与语言 · 计算机科学 2024-05-29 Ishan Kumar , Zhijing Jin , Ehsan Mokhtarian , Siyuan Guo , Yuen Chen , Mrinmaya Sachan , Bernhard Schölkopf

In the age of information overload, content management for online news articles relies on efficient summarization to enhance accessibility and user engagement. This article addresses the challenge of extractive text summarization by…

机器学习 · 计算机科学 2025-09-22 Sajib Biswas , Milon Biswas , Arunima Mandal , Fatema Tabassum Liza , Joy Sarker

We present PubMed 200k RCT, a new dataset based on PubMed for sequential sentence classification. The dataset consists of approximately 200,000 abstracts of randomized controlled trials, totaling 2.3 million sentences. Each sentence of each…

计算与语言 · 计算机科学 2017-10-18 Franck Dernoncourt , Ji Young Lee

The scientific community continues to publish an overwhelming amount of new research related to COVID-19 on a daily basis, leading to much literature without little to no attention. To aid the community in understanding the rapidly flowing…

计算与语言 · 计算机科学 2020-09-29 Jong Won Park

Datasets are critical for scientific research, playing an important role in replication, reproducibility, and efficiency. Researchers have recently shown that datasets are becoming more important for science to function properly, even…

计算与语言 · 计算机科学 2024-05-24 Tong Zeng , Daniel Acuna

Clinical Decision Support Systems (CDSS) form an important area of research. In spite of its importance, it is difficult for researchers to evaluate the domain primarily because of a considerable spread of relevant literature in…

数字图书馆 · 计算机科学 2017-09-01 Kamran Farooq , Bisma S Khan , Muaz A Niazi , Stephen J Leslie , Amir Hussain

A clinical trial is a study that evaluates new biomedical interventions. To design new trials, researchers draw inspiration from those current and completed. In 2022, there were on average more than 100 clinical trials submitted to…

计算与语言 · 计算机科学 2023-08-02 Renee D. White , Tristan Peng , Pann Sripitak , Alexander Rosenberg Johansen , Michael Snyder

Scientist learn early on how to cite scientific sources to support their claims. Sometimes, however, scientists have challenges determining where a citation should be situated -- or, even worse, fail to cite a source altogether.…

计算与语言 · 计算机科学 2024-05-21 Tong Zeng , Daniel E. Acuna

Clinical texts, represented in electronic medical records (EMRs), contain rich medical information and are essential for disease prediction, personalised information recommendation, clinical decision support, and medication pattern mining…

计算与语言 · 计算机科学 2023-10-10 Hangyu Tu , Lifeng Han , Goran Nenadic

We introduce a new tool - the CitedReferencesExplorer (CRExplorer, www.crexplorer.net) - which can be used to disambiguate and analyze the cited references (CRs) of a publication set downloaded from the Web of Science (WoS). The tool is…

数字图书馆 · 计算机科学 2016-02-17 Andreas Thor , Werner Marx , Loet Leydesdorff , Lutz Bornmann

We introduce an extractive method that will summarize long scientific papers. Our model uses presentation slides provided by the authors of the papers as the gold summary standard to label the sentences. The sentences are ranked based on…

计算与语言 · 计算机科学 2020-08-27 Athar Sefid , Clyde Lee Giles , Prasenjit Mitra

Background: A significant barrier to conducting systematic reviews and meta-analysis is efficiently finding scientifically sound relevant articles. Typically, less than 1% of articles match this requirement which leads to a highly…

计算与语言 · 计算机科学 2020-04-15 Ashwin Karthik Ambalavanan , Murthy Devarakonda

Following the global COVID-19 pandemic, the number of scientific papers studying the virus has grown massively, leading to increased interest in automated literate review. We present a clinical text mining system that improves on previous…

计算与语言 · 计算机科学 2020-12-09 Veysel Kocaman , David Talby

Current approaches to automatic summarization of scientific papers generate informative summaries in the form of abstracts. However, abstracts are not intended to show the relationship between a paper and the references cited in it. We…

计算与语言 · 计算机科学 2023-11-14 Shahbaz Syed , Ahmad Dawar Hakimi , Khalid Al-Khatib , Martin Potthast

Keyphrase extraction aims at automatically extracting a list of "important" phrases representing the key concepts in a document. Prior approaches for unsupervised keyphrase extraction resorted to heuristic notions of phrase importance via…

计算与语言 · 计算机科学 2023-02-20 Rishabh Joshi , Vidhisha Balachandran , Emily Saldanha , Maria Glenski , Svitlana Volkova , Yulia Tsvetkov

A Chief complaint (CC) is the reason for the medical visit as stated in the patient's own words. It helps medical professionals to quickly understand a patient's situation, and also serves as a short summary for medical text mining.…

计算与语言 · 计算机科学 2025-09-03 Zhimeng Luo , Zhendong Wang , Rui Meng , Diyang Xue , Adam Frisch , Daqing He

The number of scientific publications continues to rise exponentially, especially in Computer Science (CS). However, current solutions to analyze those publications restrict access behind a paywall, offer no features for visual analysis,…

数字图书馆 · 计算机科学 2022-12-02 Lennart Küll

Clinical trials (CTs) often fail due to inadequate patient recruitment. This paper tackles the challenges of CT retrieval by presenting an approach that addresses the patient-to-trials paradigm. Our approach involves two key components in a…

信息检索 · 计算机科学 2023-07-04 Wojciech Kusa , Óscar E. Mendoza , Petr Knoth , Gabriella Pasi , Allan Hanbury

We present CitNetExplorer, a new software tool for analyzing and visualizing citation networks of scientific publications. CitNetExplorer can for instance be used to study the development of a research field, to delineate the literature on…

数字图书馆 · 计算机科学 2014-04-23 Nees Jan van Eck , Ludo Waltman