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In this work, we present an approach for evaluating segmentation strategies and solving the biological problem of creating robust interpretable maps of biological data by employing wards agglomerative hierarchical clustering applied to…

定量方法 · 定量生物学 2024-02-13 Richard Tjörnhammar

Purpose: Functional Magnetic Resonance Imaging (fMRI) data acquired through resting-state studies have been used to obtain information about the spontaneous activations inside the brain. One of the approaches for analysis and interpretation…

图像与视频处理 · 电气工程与系统科学 2022-02-24 Harshit Parmar , Brian Nutter , Rodney Long , Sameer Antani , Sunanda Mitra

Clustering is a fundamental task in data analysis, and spectral clustering has been recognized as a promising approach to it. Given a graph describing the relationship between data, spectral clustering explores the underlying cluster…

机器学习 · 计算机科学 2021-09-08 Tomohiko Mizutani

An essential premise for neuroscience brain network analysis is the successful segmentation of the cerebral cortex into functionally homogeneous regions. Resting-state functional magnetic resonance imaging (rs-fMRI), capturing the…

神经元与认知 · 定量生物学 2023-09-20 Xiaoxiao Ma , Chunzhi Yi , Zhicai Zhong , Hui Zhou , Baichun Wei , Haiqi Zhu , Feng Jiang

Clustered standard errors and approximate randomization tests are popular inference methods that allow for dependence within observations. However, they require researchers to know the cluster structure ex ante. We propose a procedure to…

计量经济学 · 经济学 2022-01-14 Yong Cai

Patchwork learning arises as a new and challenging data collection paradigm where both samples and features are observed in fragmented subsets. Due to technological limits, measurement expense, or multimodal data integration, such patchwork…

统计方法学 · 统计学 2024-06-21 Lili Zheng , Andersen Chang , Genevera I. Allen

Clustering is a fundamental unsupervised learning approach. Many clustering algorithms -- such as $k$-means -- rely on the euclidean distance as a similarity measure, which is often not the most relevant metric for high dimensional data…

机器学习 · 计算机科学 2019-10-22 Aude Genevay , Gabriel Dulac-Arnold , Jean-Philippe Vert

We propose a new unbiased threshold for network analysis named the Cluster-Span Threshold (CST). This is based on the clustering coefficient, C, following logic that a balance of `clustering' to `spanning' triples results in a useful…

神经元与认知 · 定量生物学 2016-04-11 Keith Smith , Hamed Azami , Mario A. Parra , John M. Starr , Javier Escudero

Averaging amplitudes over consecutive time samples within a time-window is widely used to calculate the amplitude of an event-related potential (ERP) for cognitive neuroscience. Objective determination of the time-window is critical for…

神经元与认知 · 定量生物学 2019-11-22 Reza Mahini , Peng Xu , Guoliang Chen , Yansong Li , Weiyan Ding , Lei Zhang , Nauman Khalid Qureshi , Asoke K. Nandi , Fengyu Cong

Neural network-based clustering has recently gained popularity, and in particular a constrained clustering formulation has been proposed to perform transfer learning and image category discovery using deep learning. The core idea is to…

计算机视觉与模式识别 · 计算机科学 2018-06-29 Yen-Chang Hsu , Zhaoyang Lv , Joel Schlosser , Phillip Odom , Zsolt Kira

In this paper, we focus on how to locate the relevant or discriminative brain regions related with external stimulus or certain mental decease, which is also called support identification, based on the neuroimaging data. The main difficulty…

计算机视觉与模式识别 · 计算机科学 2015-06-09 Yilun Wang , Sheng Zhang , Junjie Zheng , Heng Chen , Huafu Chen

Clustering is a widely-used data mining tool, which aims to discover partitions of similar items in data. We introduce a new clustering paradigm, \emph{accordant clustering}, which enables the discovery of (predefined) group level insights.…

机器学习 · 计算机科学 2017-04-11 Amit Dhurandhar , Margareta Ackerman , Xiang Wang

Graph clustering (or community detection) has long drawn enormous attention from the research on web mining and information networks. Recent literature on this topic has reached a consensus that node contents and link structures should be…

社会与信息网络 · 计算机科学 2017-12-25 Carl Yang , Mengxiong Liu , Zongyi Wang , Liyuan Liu , Jiawei Han

Motivated by the need to model the dependence between regions of interest in functional neuroconnectivity for efficient inference, we propose a new sampling-based Bayesian clustering approach for covariance structures of high-dimensional…

统计方法学 · 统计学 2024-01-09 Hyoshin Kim , Sujit K. Ghosh , Adriana Di Martino , Emily C. Hector

Spectral clustering is one of the most popular clustering methods for finding clusters in a graph, which has found many applications in data mining. However, the input graph in those applications may have many missing edges due to error in…

数据结构与算法 · 计算机科学 2020-06-09 Pan Peng , Yuichi Yoshida

Recent advances in neuroscience and in the technology of functional magnetic resonance imaging (fMRI) and electro-encephalography (EEG) have propelled a growing interest in brain-network clustering via time-series analysis. Notwithstanding,…

机器学习 · 计算机科学 2019-06-07 Cong Ye , Konstantinos Slavakis , Pratik V. Patil , Sarah F. Muldoon , John Medaglia

A novel approach rooted on the notion of consensus clustering, a strategy developed for community detection in complex networks, is proposed to cope with the heterogeneity that characterizes connectivity matrices in health and disease. The…

神经元与认知 · 定量生物学 2017-05-09 Javier Rasero , Mario Pellicoro , Leonardo Angelini , Jesus M. Cortes , Daniele Marinazzo , Sebastiano Stramaglia

We propose a deep learning clustering method that exploits dense features from a segmentation network for emphysema subtyping from computed tomography (CT) scans. Using dense features enables high-resolution visualization of image regions…

图像与视频处理 · 电气工程与系统科学 2021-06-03 Weiyi Xie , Colin Jacobs , Bram van Ginneken

Spectral clustering refers to a family of unsupervised learning algorithms that compute a spectral embedding of the original data based on the eigenvectors of a similarity graph. This non-linear transformation of the data is both the key of…

机器学习 · 计算机科学 2019-01-30 Nicolas Tremblay , Andreas Loukas

Image processing is an important research area in computer vision. Image segmentation plays the vital rule in image processing research. There exist so many methods for image segmentation. Clustering is an unsupervised study. Clustering can…

计算机视觉与模式识别 · 计算机科学 2014-07-31 Dibya Jyoti Bora , Anil Kumar Gupta