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Segmentation is one of the most significant steps in image processing. Segmenting an image is a technique that makes it possible to separate a digital image into various areas based on the different characteristics of pixels in the image.…

图像与视频处理 · 电气工程与系统科学 2024-11-20 Sina Derakhshandeh , Ali Mahloojifar

Deep learning has quickly become the weapon of choice for brain lesion segmentation. However, few existing algorithms pre-configure any biological context of their chosen segmentation tissues, and instead rely on the neural network's…

计算机视觉与模式识别 · 计算机科学 2017-09-12 Andrew Beers , Ken Chang , James Brown , Emmett Sartor , CP Mammen , Elizabeth Gerstner , Bruce Rosen , Jayashree Kalpathy-Cramer

For 3D medical image (e.g. CT and MRI) segmentation, the difficulty of segmenting each slice in a clinical case varies greatly. Previous research on volumetric medical image segmentation in a slice-by-slice manner conventionally use the…

图像与视频处理 · 电气工程与系统科学 2022-07-12 Wenxuan Wang , Chen Chen , Jing Wang , Sen Zha , Yan Zhang , Jiangyun Li

Segmentation, or the outlining of objects within images, is a critical step in the measurement and analysis of cells within microscopy images. While improvements continue to be made in tools that rely on classical methods for segmentation,…

定量方法 · 定量生物学 2024-03-15 Nodar Gogoberidze , Beth A. Cimini

Accurate whole-heart segmentation is a critical component in the precise diagnosis and interventional planning of cardiovascular diseases. Integrating complementary information from modalities such as computed tomography (CT) and magnetic…

图像与视频处理 · 电气工程与系统科学 2025-11-13 Jierui Qu , Jianchun Zhao

Segmentation of cell nuclei in microscopy images is a prevalent necessity in cell biology. Especially for three-dimensional datasets, manual segmentation is prohibitively time-consuming, motivating the need for automated methods.…

计算机视觉与模式识别 · 计算机科学 2020-02-10 Peter Hirsch , Dagmar Kainmueller

Accurate building instance segmentation and height classification are critical for urban planning, 3D city modeling, and infrastructure monitoring. This paper presents a detailed analysis of YOLOv11, the recent advancement in the YOLO…

计算机视觉与模式识别 · 计算机科学 2025-11-03 Mahmoud El Hussieni , Bahadır K. Güntürk , Hasan F. Ateş , Oğuz Hanoğlu

Tracking cells in 3D at high speed continues to attract extensive attention for many biomedical applications, such as monitoring immune cell migration and observing tumor metastasis in flowing blood vessels. Here, we propose a deep…

光学 · 物理学 2018-05-16 Kan Liu , Hui Qiao , Jiamin Wu , Haoqian Wang , Lu Fang , Qionghai Dai

We propose a novel, simple and effective method to integrate lesion prior and a 3D U-Net for improving brain tumor segmentation. First, we utilize the ground-truth brain tumor lesions from a group of patients to generate the heatmaps of…

计算机视觉与模式识别 · 计算机科学 2020-02-21 Po-Yu Kao , Jefferson W. Chen , B. S. Manjunath

Cell nuclei segmentation is one of the most important tasks in the analysis of biomedical images. With ever-growing sizes and amounts of three-dimensional images to be processed, there is a need for better and faster segmentation methods.…

计算机视觉与模式识别 · 计算机科学 2017-02-20 Julian Arz , Peter Sanders , Johannes Stegmaier , Ralf Mikut

Tracking of plant cells in images obtained by microscope is a challenging problem due to biological phenomena such as large number of cells, non-uniform growth of different layers of the tightly packed plant cells and cell division.…

计算机视觉与模式识别 · 计算机科学 2023-09-22 Md Shazid Islam , Arindam Dutta , Calvin-Khang Ta , Kevin Rodriguez , Christian Michael , Mark Alber , G. Venugopala Reddy , Amit K. Roy-Chowdhury

MRI analysis takes central position in brain tumor diagnosis and treatment, thus it's precise evaluation is crucially important. However, it's 3D nature imposes several challenges, so the analysis is often performed on 2D projections that…

计算机视觉与模式识别 · 计算机科学 2018-10-10 Dmitry Lachinov , Evgeny Vasiliev , Vadim Turlapov

Many recent medical segmentation systems rely on powerful deep learning models to solve highly specific tasks. To maximize performance, it is standard practice to evaluate numerous pipelines with varying model topologies, optimization…

机器学习 · 计算机科学 2019-11-06 Mathias Perslev , Erik Bjørnager Dam , Akshay Pai , Christian Igel

Segmentation of distinct bones plays a crucial role in diagnosis, planning, navigation, and the assessment of bone metastasis. It supplies semantic knowledge to visualisation tools for the planning of surgical interventions and the…

图像与视频处理 · 电气工程与系统科学 2020-10-15 Eva Schnider , Antal Horváth , Georg Rauter , Azhar Zam , Magdalena Müller-Gerbl , Philippe C. Cattin

Brain tumor segmentation plays a pivotal role in medical image processing. In this work, we aim to segment brain MRI volumes. 3D convolution neural networks (CNN) such as 3D U-Net and V-Net employing 3D convolutions to capture the…

计算机视觉与模式识别 · 计算机科学 2019-09-24 Chen Chen , Xiaopeng Liu , Meng Ding , Junfeng Zheng , Jiangyun Li

Accurate segmentation and precise morphological analysis of neuronal cells in fluorescence microscopy images are crucial steps in neuroscience and biomedical imaging applications. However, this process is labor-intensive and time-consuming,…

图像与视频处理 · 电气工程与系统科学 2025-10-23 Banan Alnemri , Arwa Basbrain

The utilisation of deep learning segmentation algorithms that learn complex organs and tissue patterns and extract essential regions of interest from the noisy background to improve the visual ability for medical image diagnosis has…

计算机视觉与模式识别 · 计算机科学 2023-11-03 Yanming Guo

Automatic detection and segmentation of objects in 2D and 3D microscopy data is important for countless biomedical applications. In the natural image domain, spatial embedding-based instance segmentation methods are known to yield…

图像与视频处理 · 电气工程与系统科学 2021-04-30 Manan Lalit , Pavel Tomancak , Florian Jug

Brain lesion segmentation plays an essential role in neurological research and diagnosis. As brain lesions can be caused by various pathological alterations, different types of brain lesions tend to manifest with different characteristics…

图像与视频处理 · 电气工程与系统科学 2024-07-17 Xinru Zhang , Ni Ou , Berke Doga Basaran , Marco Visentin , Mengyun Qiao , Renyang Gu , Cheng Ouyang , Yaou Liu , Paul M. Matthew , Chuyang Ye , Wenjia Bai

In clinical practice, regions of interest in medical imaging often need to be identified through a process of precise image segmentation. The quality of this image segmentation step critically affects the subsequent clinical assessment of…

图像与视频处理 · 电气工程与系统科学 2021-03-23 João B. S. Carvalho , João A. Santinha , Đorđe Miladinović , Joachim M. Buhmann