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We show that standard Transformers without graph-specific modifications can lead to promising results in graph learning both in theory and practice. Given a graph, we simply treat all nodes and edges as independent tokens, augment them with…

机器学习 · 计算机科学 2022-10-25 Jinwoo Kim , Tien Dat Nguyen , Seonwoo Min , Sungjun Cho , Moontae Lee , Honglak Lee , Seunghoon Hong

We present the Topology Transformation Equivariant Representation learning, a general paradigm of self-supervised learning for node representations of graph data to enable the wide applicability of Graph Convolutional Neural Networks…

机器学习 · 计算机科学 2021-12-03 Xiang Gao , Wei Hu , Guo-Jun Qi

Graph Transformers have emerged as a powerful alternative to Message-Passing Graph Neural Networks (MP-GNNs) to address limitations such as over-squashing of information exchange. However, incorporating graph inductive bias into transformer…

机器学习 · 计算机科学 2024-04-09 Zihan Pengmei , Zimu Li

Graph neural networks (GNNs) have demonstrated great success in representation learning for graph-structured data. The layer-wise graph convolution in GNNs is shown to be powerful at capturing graph topology. During this process, GNNs are…

机器学习 · 计算机科学 2021-12-10 Mingxuan Ju , Shifu Hou , Yujie Fan , Jianan Zhao , Liang Zhao , Yanfang Ye

We propose an adaptive graph coarsening method to jointly learn graph neural network (GNN) parameters and merge nodes via K-means clustering during training. As real-world graphs grow larger, processing them directly becomes increasingly…

机器学习 · 计算机科学 2025-10-01 Rostyslav Olshevskyi , Madeline Navarro , Santiago Segarra

Graph Neural Network (GNN) aggregates the neighborhood of each node into the node embedding and shows its powerful capability for graph representation learning. However, most existing GNN variants aggregate the neighborhood information in a…

机器学习 · 计算机科学 2020-10-13 Chengsheng Mao , Liang Yao , Yuan Luo

Temporal graph neural networks (TGNNs) outperform regular GNNs by incorporating time information into graph-based operations. However, TGNNs adopt specialized models (e.g., TGN, TGAT, and APAN ) and require tailored training frameworks…

机器学习 · 计算机科学 2024-09-19 Qiang Huang , Xiao Yan , Xin Wang , Susie Xi Rao , Zhichao Han , Fangcheng Fu , Wentao Zhang , Jiawei Jiang

We investigate graph neural networks on graphs with heterophily. Some existing methods amplify a node's neighborhood with multi-hop neighbors to include more nodes with homophily. However, it is a significant challenge to set personalized…

机器学习 · 计算机科学 2022-05-17 Xiang Li , Renyu Zhu , Yao Cheng , Caihua Shan , Siqiang Luo , Dongsheng Li , Weining Qian

Graph Transformers have recently attracted attention for molecular property prediction by combining the inductive biases of graph neural networks (GNNs) with the global receptive field of Transformers. However, many existing hybrid…

机器学习 · 计算机科学 2026-04-09 Yi Yang , Ovidiu Daescu

Graph Neural Networks (GNNs) rely on graph convolutions to exploit meaningful patterns in networked data. Based on matrix multiplications, convolutions incur in high computational costs leading to scalability limitations in practice. To…

机器学习 · 计算机科学 2022-10-28 Juan Cervino , Luana Ruiz , Alejandro Ribeiro

Heterogeneous graph neural networks aim to discover discriminative node embeddings and relations from multi-relational networks.One challenge of heterogeneous graph learning is the design of learnable meta-paths, which significantly…

机器学习 · 计算机科学 2023-04-19 Zhaoliang Chen , Zhihao Wu , Luying Zhong , Claudia Plant , Shiping Wang , Wenzhong Guo

While Graph Neural Networks (GNNs) excel on graph-structured data, their performance is fundamentally limited by the quality of the observed graph, which often contains noise, missing links, or structural properties misaligned with GNNs'…

机器学习 · 计算机科学 2026-01-14 Hao Deng , Bo Liu

Many recent works have studied the performance of Graph Neural Networks (GNNs) in the context of graph homophily - a label-dependent measure of connectivity. Traditional GNNs generate node embeddings by aggregating information from a node's…

机器学习 · 计算机科学 2021-06-08 Hesham Mostafa , Marcel Nassar , Somdeb Majumdar

Graph Neural Networks (GNNs) are an effective framework for representation learning of graphs. GNNs follow a neighborhood aggregation scheme, where the representation vector of a node is computed by recursively aggregating and transforming…

机器学习 · 计算机科学 2019-02-26 Keyulu Xu , Weihua Hu , Jure Leskovec , Stefanie Jegelka

Graph transformers are the state-of-the-art for learning from graph-structured data and are empirically known to avoid several pitfalls of message-passing architectures. However, there is limited theoretical analysis on why these models…

机器学习 · 统计学 2026-03-19 Nil Ayday , Lingchu Yang , Debarghya Ghoshdastidar

Graph convolutional network (GCN) is an emerging neural network approach. It learns new representation of a node by aggregating feature vectors of all neighbors in the aggregation process without considering whether the neighbors or…

机器学习 · 计算机科学 2022-04-01 Li Zhang , Heda Song , Nikolaos Aletras , Haiping Lu

Temporal graph classification plays a critical role in applications such as cybersecurity, brain connectivity analysis, social dynamics, and traffic monitoring. Despite its significance, this problem remains underexplored compared to…

机器学习 · 计算机科学 2025-11-26 Md. Joshem Uddin , Soham Changani , Baris Coskunuzer

Graph structured data, specifically text-attributed graphs (TAG), effectively represent relationships among varied entities. Such graphs are essential for semi-supervised node classification tasks. Graph Neural Networks (GNNs) have emerged…

机器学习 · 计算机科学 2024-04-18 Kaiwen Dong , Zhichun Guo , Nitesh V. Chawla

Over the past few years, graph neural networks (GNN) and label propagation-based methods have made significant progress in addressing node classification tasks on graphs. However, in addition to their reliance on elaborate architectures and…

机器学习 · 计算机科学 2021-10-18 Yangkun Wang , Jiarui Jin , Weinan Zhang , Yong Yu , Zheng Zhang , David Wipf

Graph convolutional networks (GCNs) are powerful deep neural networks for graph-structured data. However, GCN computes the representation of a node recursively from its neighbors, making the receptive field size grow exponentially with the…

机器学习 · 统计学 2018-03-02 Jianfei Chen , Jun Zhu , Le Song