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Accurate prediction of molecular properties is essential in drug discovery and related fields. However, existing graph neural networks (GNNs) often struggle to simultaneously capture both local and global molecular structures. In this work,…

机器学习 · 计算机科学 2025-08-26 XiaYu Liu , Chao Fan , Yang Liu , Hou-biao Li

Parameter-efficient fine-tuning (PEFT) has emerged as a promising paradigm for adapting pretrained models under limited data conditions. However, most existing PEFT methods are designed for matrix-structured parameters and are not well…

计算机视觉与模式识别 · 计算机科学 2026-05-19 Guanghua He , Hancan Zhu , Gaohang Yu , An Zhang

Deep kernel learning provides an elegant and principled framework for combining the structural properties of deep learning algorithms with the flexibility of kernel methods. By means of a deep neural network, we learn a parametrized kernel…

机器学习 · 计算机科学 2020-12-14 Prudencio Tossou , Basile Dura , Francois Laviolette , Mario Marchand , Alexandre Lacoste

With the growing attention on data privacy and communication security in face recognition applications, federated learning has been introduced to learn a face recognition model with decentralized datasets in a privacy-preserving manner.…

计算机视觉与模式识别 · 计算机科学 2024-05-24 Di Qiu , Xinyang Lin , Kaiye Wang , Xiangxiang Chu , Pengfei Yan

Although large models have shown a strong capacity to solve large-scale problems in many areas including natural language and computer vision, their voluminous parameters are hard to deploy in a real-time system due to computational and…

机器学习 · 计算机科学 2025-01-07 Sirong Wu , Xi Luo , Junjie Liu , Yuhui Deng

Standard infinite-width limits of neural networks sacrifice the ability for intermediate layers to learn representations from data. Recent work (A theory of representation learning gives a deep generalisation of kernel methods, Yang et al.…

机器学习 · 统计学 2024-02-27 Edward Milsom , Ben Anson , Laurence Aitchison

Pretrained Graph Neural Networks have been widely adopted for various molecular property prediction tasks. Despite their ability to encode structural and relational features of molecules, traditional fine-tuning of such pretrained GNNs on…

机器学习 · 计算机科学 2024-01-30 Vishal Dey , Xia Ning

Deep kernel learning combines the non-parametric flexibility of kernel methods with the inductive biases of deep learning architectures. We propose a novel deep kernel learning model and stochastic variational inference procedure which…

机器学习 · 统计学 2016-11-03 Andrew Gordon Wilson , Zhiting Hu , Ruslan Salakhutdinov , Eric P. Xing

Machine learning force fields (MLFFs) are gradually evolving towards enabling molecular dynamics simulations of molecules and materials with ab initio accuracy but at a small fraction of the computational cost. However, several challenges…

The discovery of Metal-Organic Frameworks (MOFs) with application-specific properties remains a central challenge in materials chemistry, owing to the immense size and complexity of their structural design space. Conventional computational…

Kernel selection plays a central role in determining the performance of Gaussian Process (GP) models, as the chosen kernel determines both the inductive biases and prior support of functions under the GP prior. This work addresses the…

The power of foundation models (FMs) lies in their capacity to learn highly expressive representations that can be adapted to a broad spectrum of tasks. However, these pretrained models require additional training stages to become effective…

机器学习 · 计算机科学 2025-10-24 Jacob L. Block , Sundararajan Srinivasan , Liam Collins , Aryan Mokhtari , Sanjay Shakkottai

Kinetic modeling enables \textit{in vivo} quantification of tracer uptake and glucose metabolism in [${}^{18}$F]Fluorodeoxyglucose ([${}^{18}$F]FDG) dynamic positron emission tomography (dPET) imaging of mice. However, kinetic modeling…

定量方法 · 定量生物学 2025-10-27 Christian Salomonsen , Kristoffer K. Wickstrøm , Samuel Kuttner , Elisabeth Wetzer

Imitation learning traditionally requires complete state-action demonstrations from optimal or near-optimal experts. These requirements severely limit practical applicability, as many real-world scenarios provide only state observations…

机器学习 · 计算机科学 2025-11-06 Iason Chrysomallis , Georgios Chalkiadakis

The ability to accurately model interatomic interactions in large-scale systems is fundamental to understanding a wide range of physical and chemical phenomena, from drug-protein binding to the behavior of next-generation materials. While…

材料科学 · 物理学 2025-05-26 Taskin Mehereen , Sourav Saha , Intesar Jawad Jaigirdar , Chanwook Park

Deep Gaussian processes (DGP) have appealing Bayesian properties, can handle variable-sized data, and learn deep features. Their limitation is that they do not scale well with the size of the data. Existing approaches address this using a…

机器学习 · 计算机科学 2019-05-20 Issam H. Laradji , Mark Schmidt , Vladimir Pavlovic , Minyoung Kim

Client heterogeneity poses significant challenges to the performance of Quantum Federated Learning (QFL). To overcome these limitations, we propose a new approach leveraging deep unfolding, which enables clients to autonomously optimize…

机器学习 · 计算机科学 2025-06-26 Shanika Iroshi Nanayakkara , Shiva Raj Pokhrel

How do we transfer the relevant knowledge from ever larger foundation models into small, task-specific downstream models that can run at much lower costs? Standard transfer learning using pre-trained weights as the initialization transfers…

机器学习 · 计算机科学 2024-06-12 Shikai Qiu , Boran Han , Danielle C. Maddix , Shuai Zhang , Yuyang Wang , Andrew Gordon Wilson

In this work, we present a general framework for continual learning of sequentially arrived tasks with the use of pre-training, which has emerged as a promising direction for artificial intelligence systems to accommodate real-world…

机器学习 · 计算机科学 2024-07-10 Liyuan Wang , Jingyi Xie , Xingxing Zhang , Hang Su , Jun Zhu

Gaussian process (GP) emulator has been used as a surrogate model for predicting force field and molecular potential, to overcome the computational bottleneck of molecular dynamics simulation. Integrating both atomic force and energy in…

化学物理 · 物理学 2022-05-13 Hao Li , Musen Zhou , Jessalyn Sebastian , Jianzhong Wu , Mengyang Gu