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Approximate Bayesian computation (ABC) methods permit approximate inference for intractable likelihoods when it is possible to simulate from the model. However they perform poorly for high dimensional data, and in practice must usually be…

统计计算 · 统计学 2017-04-05 Dennis Prangle , Richard G. Everitt , Theodore Kypraios

Background: To assist policy makers in taking adequate decisions to stop the spread of COVID-19 pandemic, accurate forecasting of the disease propagation is of paramount importance. Materials and Methods: This paper presents a deep learning…

社会与信息网络 · 计算机科学 2020-09-28 Ahmed Ben Said , Abdelkarim Erradi , Hussein Aly , Abdelmonem Mohamed

When we face patients arriving to a hospital suffering from the effects of some illness, one of the main problems we can encounter is evaluating whether or not said patients are going to require intensive care in the near future. This…

机器学习 · 计算机科学 2023-03-13 David Quesada , Pedro Larrañaga , Concha Bielza

For a Bayesian, real-time forecasting with the posterior predictive distribution can be challenging for a variety of time series models. First, estimating the parameters of a time series model can be difficult with sample-based approaches…

应用统计 · 统计学 2022-08-08 Taylor R. Brown

Throughout the Covid-19 pandemic, a significant amount of effort had been put into developing techniques that predict the number of infections under various assumptions about the public policy and non-pharmaceutical interventions. While…

计算机与社会 · 计算机科学 2021-12-22 Sharare Zehtabian , Siavash Khodadadeh , Damla Turgut , Ladislau Bölöni

A growing number of universities worldwide use various forms of online and blended learning as part of their academic curricula. Furthermore, the recent changes caused by the COVID-19 pandemic have led to a drastic increase in importance…

机器学习 · 计算机科学 2022-09-05 Galina Deeva , Johannes De Smedt , Cecilia Saint-Pierre , Richard Weber , Jochen De Weerdt

Over a year after the start of the COVID-19 epidemics, we are still facing the virus and it is hard to correctly predict its future spread over weeks to come, as well as the impacts of potential political interventions. Current epidemic…

多智能体系统 · 计算机科学 2021-12-03 Benoit Doussin , Carole Adam , Didier Georges

Approximate Bayesian Computation (ABC for short) is a family of computational techniques which offer an almost automated solution in situations where evaluation of the posterior likelihood is computationally prohibitive, or whenever…

统计理论 · 数学 2013-06-04 Gérard Biau , Frédéric Cérou , Arnaud Guyader

Since the beginning of the COVID-19 pandemic, many dashboards have emerged as useful tools to monitor the evolution of the pandemic, inform the public, and assist governments in decision making. Our goal is to develop a globally applicable…

The COVID-19 pandemic has emphasized the need for a robust understanding of epidemic models. Current models of epidemics are classified as either mechanistic or non-mechanistic: mechanistic models make explicit assumptions on the dynamics…

机器学习 · 统计学 2022-01-14 Arnab Sarker , Ali Jadbabaie , Devavrat Shah

Short-term forecasts of infectious disease spread are a critical component in risk evaluation and public health decision making. While different models for short-term forecasting have been developed, open questions about their relative…

Optimal design facilitates intelligent data collection. In this paper, we introduce a fully Bayesian design approach for spatial processes with complex covariance structures, like those typically exhibited in natural ecosystems. Coordinate…

In this article, we consider a dynamic epidemiology model for the spread of the COVID-19 infection. Starting from the classical SEIR model, the model is modified so as to better describe characteristic features of the underlying pathogen…

种群与进化 · 定量生物学 2020-05-22 Daniela Calvetti , Alexander Hoover , Johnie Rose , Erkki Somersalo

COVID-19 pandemic is severely impacting the lives of billions across the globe. Even after taking massive protective measures like nation-wide lockdowns, discontinuation of international flight services, rigorous testing etc., the infection…

定量方法 · 定量生物学 2020-08-28 Sayantari Ghosh , Saumik Bhattacharya

Driven by the critical needs of biomanufacturing 4.0, we introduce a probabilistic knowledge graph hybrid model characterizing the risk- and science-based understanding of bioprocess mechanisms. It can faithfully capture the important…

机器学习 · 统计学 2022-10-03 Wei Xie , Keqi Wang , Hua Zheng , Ben Feng

Approximate Bayesian Computation (ABC) methods have gained in their popularity over the last decade because they expand the horizon of Bayesian parameter inference methods to the range of models for which only forward simulation is…

统计计算 · 统计学 2016-08-05 Majid K. Vakilzadeh , James L. Beck , Thomas Abrahamsson

Epidemiological models with constant parameters may not capture satisfactory infection patterns in the presence of pharmaceutical and non-pharmaceutical mitigation measures during a pandemic, since infectiousness is a function of time. In…

种群与进化 · 定量生物学 2022-05-16 K. D. Olumoyin , A. Q. M. Khaliq , K. M. Furati

Approximate Bayesian Computation (ABC) methods are increasingly used for inference in situations in which the likelihood function is either computationally costly or intractable to evaluate. Extensions of the basic ABC rejection algorithm…

统计计算 · 统计学 2020-05-01 Umberto Simola , Jessica Cisewski-Kehe , Michael U. Gutmann , Jukka Corander

Approximate Bayesian computation (ABC) is a set of techniques for Bayesian inference when the likelihood is intractable but sampling from the model is possible. This work presents a simple yet effective ABC algorithm based on the…

统计计算 · 统计学 2019-03-01 Yanzhi Chen , Michael U. Gutmann

Approximate Bayesian Computation (ABC) methods are commonly used to approximate posterior distributions in models with unknown or computationally intractable likelihoods. Classical ABC methods are based on nearest neighbor type algorithms…

统计方法学 · 统计学 2025-06-24 Meili Baragatti , Casenave Céline , Bertrand Cloez , David Métivier , Isabelle Sanchez