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Objective: Medical relations are the core components of medical knowledge graphs that are needed for healthcare artificial intelligence. However, the requirement of expert annotation by conventional algorithm development processes creates a…

机器学习 · 计算机科学 2020-09-09 Yucong Lin , Keming Lu , Yulin Chen , Chuan Hong , Sheng Yu

Document-level Relation Extraction (DRE) aims to recognize the relations between two entities. The entity may correspond to multiple mentions that span beyond sentence boundary. Few previous studies have investigated the mention…

计算与语言 · 计算机科学 2022-01-14 Chao Zhao , Daojian Zeng , Lu Xu , Jianhua Dai

We introduce a biomedical information extraction (IE) pipeline that extracts biological relationships from text and demonstrate that its components, such as named entity recognition (NER) and relation extraction (RE), outperform…

机器学习 · 计算机科学 2020-11-13 Jupinder Parmar , William Koehler , Martin Bringmann , Katharina Sophia Volz , Berk Kapicioglu

Biomedical knowledge graphs (KGs) are vital for drug discovery and clinical decision support but remain incomplete. Large language models (LLMs) excel at extracting biomedical relations, yet their outputs lack standardization and alignment…

信息检索 · 计算机科学 2025-12-01 Olawumi Olasunkanmi , Mathew Satusky , Hong Yi , Chris Bizon , Harlin Lee , Stanley Ahalt

Document-level relation extraction is a challenging task which requires reasoning over multiple sentences in order to predict relations in a document. In this paper, we pro-pose a joint training frameworkE2GRE(Entity and Evidence Guided…

计算与语言 · 计算机科学 2020-08-28 Kevin Huang , Guangtao Wang , Tengyu Ma , Jing Huang

Multi-modal named entity recognition (NER) and relation extraction (RE) aim to leverage relevant image information to improve the performance of NER and RE. Most existing efforts largely focused on directly extracting potentially useful…

计算与语言 · 计算机科学 2022-12-06 Xinyu Wang , Jiong Cai , Yong Jiang , Pengjun Xie , Kewei Tu , Wei Lu

Recognizing entities in texts is a central need in many information-seeking scenarios, and indeed, Named Entity Recognition (NER) is arguably one of the most successful examples of a widely adopted NLP task and corresponding NLP technology.…

计算与语言 · 计算机科学 2023-10-24 Uri Katz , Matan Vetzler , Amir DN Cohen , Yoav Goldberg

Relation extraction (RE) is one of the most important tasks in information extraction, as it provides essential information for many NLP applications. In this paper, we propose a cross-lingual RE approach that does not require any human…

计算与语言 · 计算机科学 2020-10-20 Jian Ni , Taesun Moon , Parul Awasthy , Radu Florian

The challenge of recognizing named entities in a given text has been a very dynamic field in recent years. This is due to the advances in neural network architectures, increase of computing power and the availability of diverse labeled…

计算与语言 · 计算机科学 2023-01-10 Nasi Jofche , Kostadin Mishev , Riste Stojanov , Milos Jovanovik , Dimitar Trajanov

Distantly-supervised relation extraction (RE) is an effective method to scale RE to large corpora but suffers from noisy labels. Existing approaches try to alleviate noise through multi-instance learning and by providing additional…

计算与语言 · 计算机科学 2021-02-03 Despina Christou , Grigorios Tsoumakas

Contextual information is widely considered for NLP and knowledge discovery in life sciences since it highly influences the exact meaning of natural language. The scientific challenge is not only to extract such context data, but also to…

数据库 · 计算机科学 2020-01-24 Jens Dörpinghaus , Andreas Stefan , Bruce Schultz , Marc Jacobs

Background : Knowledge is evolving over time, often as a result of new discoveries or changes in the adopted methods of reasoning. Also, new facts or evidence may become available, leading to new understandings of complex phenomena. This is…

计算与语言 · 计算机科学 2023-04-24 Ayoub Harnoune , Maryem Rhanoui , Mounia Mikram , Siham Yousfi , Zineb Elkaimbillah , Bouchra El Asri

Biomedical Information Extraction is an exciting field at the crossroads of Natural Language Processing, Biology and Medicine. It encompasses a variety of different tasks that require application of state-of-the-art NLP techniques, such as…

计算与语言 · 计算机科学 2017-05-17 Surag Nair

Document Understanding is an evolving field in Natural Language Processing (NLP). In particular, visual and spatial features are essential in addition to the raw text itself and hence, several multimodal models were developed in the field…

计算与语言 · 计算机科学 2024-04-18 Wiam Adnan , Joel Tang , Yassine Bel Khayat Zouggari , Seif Edinne Laatiri , Laurent Lam , Fabien Caspani

Document-level relation extraction (DocRE) is a task that focuses on identifying relations between entities within a document. However, existing DocRE models often overlook the correlation between relations and lack a quantitative analysis…

信息检索 · 计算机科学 2023-10-23 Yusheng Huang , Zhouhan Lin

In recent years, there has been an increasing number of frameworks developed for biomedical entity and relation extraction. This research effort aims to address the accelerating growth in biomedical publications and the intricate nature of…

计算与语言 · 计算机科学 2024-08-14 Minh Nguyen , Phuong Le

Relation Extraction (RE) serves as a crucial technology for transforming unstructured text into structured information, especially within the framework of Knowledge Graph development. Its importance is emphasized by its essential role in…

计算与语言 · 计算机科学 2024-06-27 Dawulie Jinensibieke , Mieradilijiang Maimaiti , Wentao Xiao , Yuanhang Zheng , Xiaobo Wang

Long text classification is challenging for Large Language Models (LLMs) due to token limits and high computational costs. This study explores whether a Retrieval Augmented Generation (RAG) approach using only the most relevant text…

Entity Linking (EL) and Relation Extraction (RE) are fundamental tasks in Natural Language Processing, serving as critical components in a wide range of applications. In this paper, we propose ReLiK, a Retriever-Reader architecture for both…

计算与语言 · 计算机科学 2025-05-12 Riccardo Orlando , Pere-Lluis Huguet Cabot , Edoardo Barba , Roberto Navigli

Adverse drug reactions / events (ADR/ADE) have a major impact on patient health and health care costs. Detecting ADR's as early as possible and sharing them with regulators, pharma companies, and healthcare providers can prevent morbidity…

计算与语言 · 计算机科学 2022-01-07 Hasham Ul Haq , Veysel Kocaman , David Talby