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Deep neural networks (DNN) have been used successfully in many scientific problems for their high prediction accuracy, but their application to genetic studies remains challenging due to their poor interpretability. In this paper, we…

机器学习 · 计算机科学 2021-10-01 Peyman H. Kassani , Fred Lu , Yann Le Guen , Zihuai He

How can we find interpretable, domain-appropriate models of natural phenomena given some complex, raw data such as images? Can we use such models to derive scientific insight from the data? In this paper, we propose some methods for…

机器学习 · 计算机科学 2024-02-06 Christopher J. Soelistyo , Alan R. Lowe

Tabular datasets with low-sample-size or many variables are prevalent in biomedicine. Practitioners in this domain prefer linear or tree-based models over neural networks since the latter are harder to interpret and tend to overfit when…

机器学习 · 计算机科学 2022-02-09 Junchen Yang , Ofir Lindenbaum , Yuval Kluger

Cell individualization has a vital role in digital pathology image analysis. Deep Learning is considered as an efficient tool for instance segmentation tasks, including cell individualization. However, the precision of the Deep Learning…

图像与视频处理 · 电气工程与系统科学 2022-08-09 Huaqian Wu , Nicolas Souedet , Zhenzhen You , Caroline Jan , Cédric Clouchoux , Thierry Delzescaux

Weakly supervised semantic segmentation receives much research attention since it alleviates the need to obtain a large amount of dense pixel-wise ground-truth annotations for the training images. Compared with other forms of weak…

计算机视觉与模式识别 · 计算机科学 2018-03-08 Tianyi Zhang , Guosheng Lin , Jianfei Cai , Tong Shen , Chunhua Shen , Alex C. Kot

Deep Convolutional Neural Networks have proven effective in solving the task of semantic segmentation. However, their efficiency heavily relies on the pixel-level annotations that are expensive to get and often require domain expertise,…

计算机视觉与模式识别 · 计算机科学 2020-07-03 Ostap Viniavskyi , Mariia Dobko , Oles Dobosevych

Skin cancer is one of the deadliest diseases and has a high mortality rate if left untreated. The diagnosis generally starts with visual screening and is followed by a biopsy or histopathological examination. Early detection can aid in…

计算机视觉与模式识别 · 计算机科学 2023-10-12 Mahapara Khurshid , Mayank Vatsa , Richa Singh

We consider the task of learning a classifier for semantic segmentation using weak supervision in the form of image labels which specify the object classes present in the image. Our method uses deep convolutional neural networks (CNNs) and…

计算机视觉与模式识别 · 计算机科学 2017-11-07 Qinbin Hou , Puneet Kumar Dokania , Daniela Massiceti , Yunchao Wei , Ming-Ming Cheng , Philip Torr

Patch-level image representation is very important for object classification and detection, since it is robust to spatial transformation, scale variation, and cluttered background. Many existing methods usually require fine-grained…

计算机视觉与模式识别 · 计算机科学 2017-05-09 Peng Tang , Xinggang Wang , Zilong Huang , Xiang Bai , Wenyu Liu

In digital pathology, segmenting densely distributed objects like glands and nuclei is crucial for downstream analysis. Since detailed pixel-wise annotations are very time-consuming, we need semi-supervised segmentation methods that can…

图像与视频处理 · 电气工程与系统科学 2024-07-18 Meilong Xu , Xiaoling Hu , Saumya Gupta , Shahira Abousamra , Chao Chen

Most existing interpretable methods explain a black-box model in a post-hoc manner, which uses simpler models or data analysis techniques to interpret the predictions after the model is learned. However, they (a) may derive contradictory…

机器学习 · 计算机科学 2020-01-22 Mengzhuo Guo , Qingpeng Zhang , Xiuwu Liao , Daniel Dajun Zeng

This paper proposes a generic method to learn interpretable convolutional filters in a deep convolutional neural network (CNN) for object classification, where each interpretable filter encodes features of a specific object part. Our method…

机器学习 · 计算机科学 2020-03-13 Quanshi Zhang , Xin Wang , Ying Nian Wu , Huilin Zhou , Song-Chun Zhu

Interpretability is crucial to enhance trust in machine learning models for medical diagnostics. However, most state-of-the-art image classifiers based on neural networks are not interpretable. As a result, clinicians often resort to known…

Recent work on mode connectivity in the loss landscape of deep neural networks has demonstrated that the locus of (sub-)optimal weight vectors lies on continuous paths. In this work, we train a neural network that serves as a hypernetwork,…

机器学习 · 统计学 2019-05-09 Lior Deutsch , Erik Nijkamp , Yu Yang

Deep learning has demonstrated significant potential in medical imaging; however, the opacity of "black-box" models hinders clinical trust, while segmentation tasks typically necessitate labourious, hard-to-obtain pixel-wise annotations. To…

图像与视频处理 · 电气工程与系统科学 2026-01-22 Soumick Chatterjee , Hadya Yassin , Florian Dubost , Andreas Nürnberger , Oliver Speck

To ensure global food security and the overall profit of stakeholders, the importance of correctly detecting and classifying plant diseases is paramount. In this connection, the emergence of deep learning-based image classification has…

计算机视觉与模式识别 · 计算机科学 2022-07-05 Sabbir Ahmed , Md. Bakhtiar Hasan , Tasnim Ahmed , Redwan Karim Sony , Md. Hasanul Kabir

Diagnosing rare diseases presents a common challenge in clinical practice, necessitating the expertise of specialists for accurate identification. The advent of machine learning offers a promising solution, while the development of such…

For navigation of robots, image segmentation is an important component to determining a terrain's traversability. For safe and efficient navigation, it is key to assess the uncertainty of the predicted segments. Current uncertainty…

计算机视觉与模式识别 · 计算机科学 2024-07-19 Judith Dijk , Gertjan Burghouts , Kapil D. Katyal , Bryanna Y. Yeh , Craig T. Knuth , Ella Fokkinga , Tejaswi Kasarla , Pascal Mettes

We propose a 3D convolutional neural network to simultaneously segment and detect cell nuclei in confocal microscopy images. Mirroring the co-dependency of these tasks, our proposed model consists of two serial components: the first part…

图像与视频处理 · 电气工程与系统科学 2018-09-07 Sundaresh Ram , Vicky T. Nguyen , Kirsten H. Limesand , Mert R. Sabuncu

Polyp segmentation is a crucial step towards computer-aided diagnosis of colorectal cancer. However, most of the polyp segmentation methods require pixel-wise annotated datasets. Annotated datasets are tedious and time-consuming to produce,…

计算机视觉与模式识别 · 计算机科学 2022-11-23 Guangyu Ren , Michalis Lazarou , Jing Yuan , Tania Stathaki
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