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Background: Natural Language Processing (NLP) is widely used to extract clinical insights from Electronic Health Records (EHRs). However, the lack of annotated data, automated tools, and other challenges hinder the full utilisation of NLP…

计算与语言 · 计算机科学 2023-06-23 Elias Hossain , Rajib Rana , Niall Higgins , Jeffrey Soar , Prabal Datta Barua , Anthony R. Pisani , Ph. D , Kathryn Turner}

In this paper, we present our approach to extracting structured information from unstructured Electronic Health Records (EHR) [2] which can be used to, for example, study adverse drug reactions in patients due to chemicals in their…

计算与语言 · 计算机科学 2020-01-30 Amogh Kamat Tarcar , Aashis Tiwari , Vineet Naique Dhaimodker , Penjo Rebelo , Rahul Desai , Dattaraj Rao

The widespread adoption of Electronic Health Records (EHR) has significantly increased the amount of available healthcare data. This has allowed models inspired by Natural Language Processing (NLP) and Computer Vision, which scale…

Osteoarthritis (OA) poses a global health challenge, demanding precise diagnostic methods. Current radiographic assessments are time consuming and prone to variability, prompting the need for automated solutions. The existing deep learning…

计算机视觉与模式识别 · 计算机科学 2024-01-15 Banafshe Felfeliyan , Yuyue Zhou , Shrimanti Ghosh , Jessica Kupper , Shaobo Liu , Abhilash Hareendranathan , Jacob L. Jaremko

Document digitization is essential for the digital transformation of our societies, yet a crucial step in the process, Optical Character Recognition (OCR), is still not perfect. Even commercial OCR systems can produce questionable output…

The Bidirectional Encoder Representations from Transformers (BERT) model has achieved the state-of-the-art performance for many natural language processing (NLP) tasks. Yet, limited research has been contributed to studying its…

计算与语言 · 计算机科学 2021-09-23 Zimin Wan , Chenchen Xu , Hanna Suominen

Electronic health records (EHRs), digital collections of patient healthcare events and observations, are ubiquitous in medicine and critical to healthcare delivery, operations, and research. Despite this central role, EHRs are notoriously…

Electronic health records (EHR) are widely believed to hold a profusion of actionable insights, encrypted in an irregular, semi-structured format, amidst a loud noise background. To simplify learning patterns of health and disease, medical…

计算与语言 · 计算机科学 2022-12-13 David A. Bloore , Romane Gauriau , Anna L. Decker , Jacob Oppenheim

Extracting information from electronic health records (EHR) is a challenging task since it requires prior knowledge of the reports and some natural language processing algorithm (NLP). With the growing number of EHR implementations, such…

机器学习 · 计算机科学 2019-08-02 Sanghyun Choi , Nikita Ivkin , Vladimir Braverman , Michael A. Jacobs

Many real-world applications involve the use of Optical Character Recognition (OCR) engines to transform handwritten images into transcripts on which downstream Natural Language Processing (NLP) models are applied. In this process, OCR…

计算与语言 · 计算机科学 2021-07-16 Guowei Xu , Wenbiao Ding , Weiping Fu , Zhongqin Wu , Zitao Liu

Unstructured clinical text in EHRs contains crucial information for applications including decision support, trial matching, and retrospective research. Recent work has applied BERT-based models to clinical information extraction and text…

计算与语言 · 计算机科学 2020-11-13 Kexin Huang , Sankeerth Garapati , Alexander S. Rich

Optical Character Recognition (OCR) continues to face accuracy challenges that impact subsequent applications. To address these errors, we explore the utility of OCR confidence scores for enhancing post-OCR error detection. Our study…

计算机视觉与模式识别 · 计算机科学 2024-09-09 Arthur Hemmer , Mickaël Coustaty , Nicola Bartolo , Jean-Marc Ogier

Automating the annotation of scanned documents is challenging, requiring a balance between computational efficiency and accuracy. DocParseNet addresses this by combining deep learning and multi-modal learning to process both text and visual…

计算机视觉与模式识别 · 计算机科学 2024-07-23 Ahmad Mohammadshirazi , Ali Nosrati Firoozsalari , Mengxi Zhou , Dheeraj Kulshrestha , Rajiv Ramnath

Background Predicting mortality and resource utilization from electronic health records (EHRs) is challenging yet crucial for optimizing patient outcomes and managing costs in intensive care unit (ICU). Existing approaches predominantly…

计算与语言 · 计算机科学 2025-08-29 Yucheng Ruan , Xiang Lan , Daniel J. Tan , Hairil Rizal Abdullah , Mengling Feng

This paper conducts a comprehensive investigation into applying large language models, particularly on BioBERT, in healthcare. It begins with thoroughly examining previous natural language processing (NLP) approaches in healthcare, shedding…

人工智能 · 计算机科学 2023-10-13 Shyni Sharaf , V. S. Anoop

Clinical reports are often fragmented across healthcare institutions because privacy regulations and data silos limit direct information sharing. When patients seek care at a different hospital, they often carry paper or scanned reports…

计算与语言 · 计算机科学 2026-05-12 Yu Wang , Yingyun Li , Ying Qin , Haiyang Qian

Objective: The advent of Electronic Medical Records (EMR) with large electronic imaging databases along with advances in deep neural networks with machine learning has provided a unique opportunity to achieve milestones in automated image…

机器学习 · 统计学 2016-12-16 Cecilia S. Lee , Doug M. Baughman , Aaron Y. Lee

Deep neural networks are increasingly used in medical imaging for tasks such as pathological classification, but they face challenges due to the scarcity of high-quality, expert-labeled training data. Recent efforts have utilized…

机器学习 · 计算机科学 2024-10-14 Jongseong Jang , Daeun Kyung , Seung Hwan Kim , Honglak Lee , Kyunghoon Bae , Edward Choi

Deep learning (DL) based predictive models from electronic health records (EHR) deliver impressive performance in many clinical tasks. Large training cohorts, however, are often required to achieve high accuracy, hindering the adoption of…

计算与语言 · 计算机科学 2020-05-27 Laila Rasmy , Yang Xiang , Ziqian Xie , Cui Tao , Degui Zhi

A 3D deep learning model (OARnet) is developed and used to delineate 28 H&N OARs on CT images. OARnet utilizes a densely connected network to detect the OAR bounding-box, then delineates the OAR within the box. It reuses information from…

图像与视频处理 · 电气工程与系统科学 2021-11-24 Mumtaz Hussain Soomro , Hamidreza Nourzadeh , Victor Gabriel Leandro Alves , Wookjin Choi , Jeffrey V. Siebers
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