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In this paper, the OpenACC heterogeneous parallel programming model is successfully applied to modification and acceleration of the three-dimensional Tokamak magnetohydrodynamical code (CLTx). Through combination of OpenACC and MPI…

计算物理 · 物理学 2019-10-31 H. W. Zhang , J. Zhu , Z. W. Ma , G. Y. Kan , X. Wang , W. Zhang

Persistent homology is a crucial invariant that is used in many areas to understand data. The $O(N^4)$ run time is a hindrance to its use on most large datasets. We give a parallelization method to utilize multi-core machines and clusters.…

分布式、并行与集群计算 · 计算机科学 2022-03-10 Michael G. Rawson

Realistic simulations of detailed, biophysics-based, multi-scale models require very high resolution and, thus, large-scale compute facilities. Existing simulation environments, especially for biomedical applications, are designed to allow…

No area of computing is hungrier for performance than High Performance Computing (HPC), the demands of which continue to be a major driver for processor performance and adoption of accelerators, and also advances in memory, storage, and…

分布式、并行与集群计算 · 计算机科学 2021-08-18 Pablo Ouro , Unai Lopez-Novoa , Martyn Guest

We present a scalable dissipative particle dynamics simulation code, fully implemented on the Graphics Processing Units (GPUs) using a hybrid CUDA/MPI programming model, which achieves 10-30 times speedup on a single GPU over 16 CPU cores…

分布式、并行与集群计算 · 计算机科学 2014-12-01 Yu-Hang Tang , George Em Karniadakis

We present the numerical relativity module within AthenaK, an open source performance-portable astrophysics code designed for exascale computing applications. This module employs the Z4c formulation to solve the Einstein equations. We…

广义相对论与量子宇宙学 · 物理学 2024-09-17 Hengrui Zhu , Jacob Fields , Francesco Zappa , David Radice , James Stone , Alireza Rashti , William Cook , Sebastiano Bernuzzi , Boris Daszuta

As GPU-accelerated mathematical programming techniques mature, there is growing interest in utilizing them to address the computational challenges of power system optimization. This paper introduces ExaModelsPower.jl, an open-source…

系统与控制 · 电气工程与系统科学 2026-03-16 Sanjay Johnson , Dirk Lauinger , Sungho Shin , François Pacaud

We present STREAmS, an in-house high-fidelity solver for large-scale, massively parallel direct numerical simulations (DNS) of compressible turbulent flows on graphical processing units (GPUs). STREAmS is written in the Fortran 90 language…

计算物理 · 物理学 2020-04-07 Matteo Bernardini , Davide Modesti , Francesco Salvadore , Sergio Pirozzoli

Hybrid computational architectures based on the joint power of Central Processing Units and Graphic Processing Units (GPUs) are becoming popular and powerful hardware tools for a wide range of simulations in biology, chemistry, engineering,…

天体物理仪器与方法 · 物理学 2015-06-15 Roberto Capuzzo-Dolcetta , Mario Spera

Mixed-precision computing has the potential to significantly reduce the cost of exascale computations, but determining when and how to implement it in programs can be challenging. In this article, we propose a methodology for enabling…

数学软件 · 计算机科学 2025-07-02 Yanxiang Chen , Pablo de Oliveira Castro , Paolo Bientinesi , Niclas Jansson , Roman Iakymchuk

Adaptive mesh refinement (AMR) in the high-order spectral-element method code Nek5000 is demonstrated and validated with well-resolved large-eddy simulations (LES) of the flow past a wing profile. In the present work, the flow around a NACA…

流体动力学 · 物理学 2021-08-30 F. Mallor , Á. Tanarro , N. Offermans , A. Peplinski , R. Vinuesa , P. Schlatter

This paper focuses on the parallel implementation of a direct $N$-body method~(particle-particle algorithm) and the application of multiple GPUs for galactic dynamics simulations. Application of a hybrid OpenMP-CUDA technology is considered…

计算物理 · 物理学 2018-03-06 S. S. Khrapov , S. A. Khoperskov , A. V. Khoperskov

The use of reduced and mixed precision computing has gained increasing attention in high-performance computing (HPC) as a means to improve computational efficiency, particularly on modern hardware architectures like GPUs. In this work, we…

计算工程、金融与科学 · 计算机科学 2025-05-28 Bálint Siklósi , Pushpender K. Sharma , David J. Lusher , István Z. Reguly , Neil D. Sandham

Recent progress in artificial intelligence (AI) and high-performance computing (HPC) have brought potentially game-changing opportunities in accelerating reactive flow simulations. In this study, we introduce an open-source computational…

计算工程、金融与科学 · 计算机科学 2023-12-22 Runze Mao , Yingrui Wang , Min Zhang , Han Li , Jiayang Xu , Xinyu Dong , Yan Zhang , Zhi X. Chen

We present a portable platform, called PIC_ENGINE, for accelerating Particle-In-Cell (PIC) codes on heterogeneous many-core architectures such as Graphic Processing Units (GPUs). The aim of this development is efficient simulations on…

计算物理 · 物理学 2016-06-08 F. Hariri , T. M. Tran , A. Jocksch , E. Lanti , J. Progsch , P. Messmer , S. Brunner , G. Gheller , L. Villard

In recent years, it has become increasingly common for high performance computers (HPC) to possess some level of heterogeneous architecture - typically in the form of GPU accelerators. In some machines these are isolated within a dedicated…

分布式、并行与集群计算 · 计算机科学 2022-10-19 I. Zacharoudiou , J. W. S. McCullough , P. V. Coveney

The HPEC Graph Challenge is a collection of benchmarks representing complex workloads that test the hardware and software components of HPC systems, which traditional benchmarks, such as LINPACK, do not. The first benchmark, Subgraph…

分布式、并行与集群计算 · 计算机科学 2025-09-05 Siddharth Samsi , Dan Campbell , Emanuel Scoullos , Oded Green

It is demonstrated how the non-proprietary OpenACC standard of compiler directives may be used to compactly and efficiently accelerate the rate-determining steps of two of the most routinely applied many-body methods of electronic structure…

化学物理 · 物理学 2017-09-15 Janus Juul Eriksen

Training large language models requires extensive processing, made possible by many high-performance computing resources. This study compares multi-node and multi-GPU environments for training large language models of electrocardiograms. It…

分布式、并行与集群计算 · 计算机科学 2025-03-28 Dimitar Mileski , Nikola Petrovski , Marjan Gusev

An existing hybrid MPI-OpenMP scheme is augmented with a CUDA-based fine grain parallelization approach for multidimensional distributed Fourier transforms, in a well-characterized pseudospectral fluid turbulence code. Basics of the hybrid…

计算物理 · 物理学 2018-08-07 Duane Rosenberg , Pablo D. Mininni , Raghu Reddy , Annick Pouquet