相关论文: De-identification of Unstructured Clinical Texts f…

We propose an end-to-end ensemble method for person re-identification (ReID) to address the problem of overfitting in discriminative models. These models are known to converge easily, but they are biased to the training data in general and…

Recently, the task of distantly supervised (DS) ultra-fine entity typing has received significant attention. However, DS data is noisy and often suffers from missing or wrong labeling issues resulting in low precision and low recall. This…

Medical coding, the translation of unstructured clinical text into standardized medical codes, is a crucial but time-consuming healthcare practice. Though large language models (LLM) could automate the coding process and improve the…

Person re-identification (Re-ID) models usually show a limited performance when they are trained on one dataset and tested on another dataset due to the inter-dataset bias (e.g. completely different identities and backgrounds) and the…

Text-to-image (T2I) models exhibit a significant yet under-explored "brand bias", a tendency to generate contents featuring dominant commercial brands from generic prompts, posing ethical and legal risks. We propose CIDER, a novel,…

Problem lists are intended to provide clinicians with a relevant summary of patient medical issues and are embedded in many electronic health record systems. Despite their importance, problem lists are often cluttered with resolved or…

Seq2seq coreference models have introduced a new paradigm for coreference resolution by learning to generate text corresponding to coreference labels, without requiring task-specific parameters. While these models achieve new…

Named entity disambiguation (NED), which involves mapping textual mentions to structured entities, is particularly challenging in the medical domain due to the presence of rare entities. Existing approaches are limited by the presence of…

State-of-the-art deep learning approaches for skin lesion recognition often require pretraining on larger and more varied datasets, to overcome the generalization limitations derived from the reduced size of the skin lesion imaging…

The task of clustering unlabeled time series and sequences entails a particular set of challenges, namely to adequately model temporal relations and variable sequence lengths. If these challenges are not properly handled, the resulting…

In many scenarios, named entity recognition (NER) models severely suffer from unlabeled entity problem, where the entities of a sentence may not be fully annotated. Through empirical studies performed on synthetic datasets, we find two…

Text summarization and text simplification are two major ways to simplify the text for poor readers, including children, non-native speakers, and the functionally illiterate. Text summarization is to produce a brief summary of the main…

Biological sequence analysis relies on the ability to denoise the imprecise output of sequencing platforms. We consider a common setting where a short sequence is read out repeatedly using a high-throughput long-read platform to generate…

Clinical diagnosis, which aims to assign diagnosis codes for a patient based on the clinical note, plays an essential role in clinical decision-making. Considering that manual diagnosis could be error-prone and time-consuming, many…

When an entity name contains other names within it, the identification of all combinations of names can become difficult and expensive. We propose a new method to recognize not only outermost named entities but also inner nested ones. We…

As Machine Learning models continue to be relied upon for making automated decisions, the issue of model bias becomes more and more prevalent. In this paper, we approach training a text classifica-tion model and optimize on bias…

Schema linking -- the process of aligning natural language questions with database schema elements -- is a critical yet underexplored component of Text-to-SQL systems. While recent methods have focused primarily on improving SQL generation,…

We propose an effective structured learning based approach to the problem of person re-identification which outperforms the current state-of-the-art on most benchmark data sets evaluated. Our framework is built on the basis of multiple…

This technical report introduces a Named Clinical Entity Recognition Benchmark for evaluating language models in healthcare, addressing the crucial natural language processing (NLP) task of extracting structured information from clinical…

Biomedical entity linking is the task of identifying mentions of biomedical concepts in text documents and mapping them to canonical entities in a target thesaurus. Recent advancements in entity linking using BERT-based models follow a…