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In the noisy primitives model, each primitive comparison performed by an algorithm, e.g., testing whether one value is greater than another, returns the incorrect answer with random, independent probability p < 1/2 and otherwise returns a…

计算几何 · 计算机科学 2026-02-13 Michael T. Goodrich , Vinesh Sridhar

We study the effect of shared non-signaling correlations for the problem of simulating a channel using noiseless communication in the one-shot setting. For classical channels, we show how to round any non-signaling-assisted simulation…

量子物理 · 物理学 2024-11-18 Aadil Oufkir , Omar Fawzi , Mario Berta

Detailed modeling and simulation of biochemical systems is complicated by the problem of combinatorial complexity, an explosion in the number of species and reactions due to myriad protein-protein interactions and post-translational…

定量方法 · 定量生物学 2014-05-20 Justin S. Hogg , Leonard A. Harris , Lori J. Stover , Niketh S. Nair , James R. Faeder

Decision tree (and its extensions such as Gradient Boosting Decision Trees and Random Forest) is a widely used machine learning algorithm, due to its practical effectiveness and model interpretability. With the emergence of big data, there…

机器学习 · 计算机科学 2016-11-07 Qi Meng , Guolin Ke , Taifeng Wang , Wei Chen , Qiwei Ye , Zhi-Ming Ma , Tie-Yan Liu

This article presents new algorithms for massively parallel granular dynamics simulations on distributed memory architectures using a domain partitioning approach. Collisions are modelled with hard contacts in order to hide their…

计算工程、金融与科学 · 计算机科学 2015-01-26 Tobias Preclik , Ulrich Rüde

We study the computational complexity of the recently proposed nubot model of molecular-scale self-assembly. The model generalises asynchronous cellular automata to have non-local movement where large assemblies of molecules can be pushed…

新兴技术 · 计算机科学 2014-09-08 Moya Chen , Doris Xin , Damien Woods

We explore an approach due to Nievergelt of decomposing a time-evolution equation along the time dimension and solving it in parallel with as little communication as possible between the processors. This method computes a map from initial…

数值分析 · 数学 2015-05-21 Andrew T. Barker

Inspired by the quantum computing algorithms for Linear Algebra problems [HHL,TaShma] we study how the simulation on a classical computer of this type of "Phase Estimation algorithms" performs when we apply it to solve the Eigen-Problem of…

数据结构与算法 · 计算机科学 2017-04-07 Michael Ben-Or , Lior Eldar

We present a shared control paradigm that improves a user's ability to operate complex, dynamic systems in potentially dangerous environments without a priori knowledge of the user's objective. In this paradigm, the role of the autonomous…

机器人学 · 计算机科学 2019-06-07 Alexander Broad , Todd Murphey , Brenna Argall

Many deep learning applications benefit from using large models with billions of parameters. Training these models is notoriously expensive due to the need for specialized HPC clusters. In this work, we consider alternative setups for…

分布式、并行与集群计算 · 计算机科学 2023-06-30 Max Ryabinin , Tim Dettmers , Michael Diskin , Alexander Borzunov

We analyze the evolution of the local simulation times (LST) in Parallel Discrete Event Simulations. The new ingredients introduced are i) we associate the LST with the nodes and not with the processing elements, and 2) we propose to…

统计力学 · 物理学 2009-11-10 L. N. Shchur , M. A. Novotny

We consider the problem of efficiently simulating population protocols. In the population model, we are given a distributed system of $n$ agents modeled as identical finite-state machines. In each time step, a pair of agents is selected…

数据结构与算法 · 计算机科学 2020-05-08 Petra Berenbrink , David Hammer , Dominik Kaaser , Ulrich Meyer , Manuel Penschuck , Hung Tran

We present a new parallel algorithm for solving triangular systems with multiple right hand sides (TRSM). TRSM is used extensively in numerical linear algebra computations, both to solve triangular linear systems of equations as well as to…

分布式、并行与集群计算 · 计算机科学 2017-03-23 Tobias Wicky , Edgar Solomonik , Torsten Hoefler

Current supercomputers often have a heterogeneous architecture using both CPUs and GPUs. At the same time, numerical simulation tasks frequently involve multiphysics scenarios whose components run on different hardware due to multiple…

计算工程、金融与科学 · 计算机科学 2024-12-10 Samuel Kemmler , Christoph Rettinger , Ulrich Rüde , Pablo Cuéllar , Harald Köstler

This paper presents a randomized self-stabilizing algorithm that elects a leader $r$ in a general $n$-node undirected graph and constructs a spanning tree $T$ rooted at $r$. The algorithm works under the synchronous message passing network…

分布式、并行与集群计算 · 计算机科学 2020-08-13 Xavier Défago , Yuval Emek , Shay Kutten , Toshimitsu Masuzawa , Yasumasa Tamura

While transistor density is still increasing, clock speeds are not, motivating the search for new parallel architectures. One approach is to completely abandon the concept of CPU -- and thus serial imperative programming -- and instead to…

分布式、并行与集群计算 · 计算机科学 2026-02-24 Harry Fitchett , Charles Fox

As the acquisition cost of the graphics processing unit (GPU) has decreased, personal computers (PC) can handle optimization problems nowadays. In optimization computing, intelligent swarm algorithms (SIAs) method is suitable for…

神经与进化计算 · 计算机科学 2021-10-05 Wei-Chang Yeh , Zhenyao Liu , Shi-Yi Tan , Shang-Ke Huang

Graph neural networks (GNNs) are widely used for learning on graph datasets derived from various real-world scenarios. Learning from extremely large graphs requires distributed training, and mini-batching with sampling is a popular approach…

In this paper we develop optimal algorithms in the binary-forking model for a variety of fundamental problems, including sorting, semisorting, list ranking, tree contraction, range minima, and ordered set union, intersection and difference.…

数据结构与算法 · 计算机科学 2020-06-26 Guy E. Blelloch , Jeremy T. Fineman , Yan Gu , Yihan Sun

Issues in co-evolutionary population dynamics have long been studied via computationally intensive simulations of minimally simple agent-based models, known as Evolutionary Spatial Cyclic Games (ESCGs), involving multiple interacting…

种群与进化 · 定量生物学 2024-10-07 Dave Cliff