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We propose a combination of a variational autoencoder and a transformer based model which fully utilises graph convolutional and graph pooling layers to operate directly on graphs. The transformer model implements a novel node encoding…

机器学习 · 计算机科学 2021-04-12 Joshua Mitton , Hans M. Senn , Klaas Wynne , Roderick Murray-Smith

Generative models for graph data are an important research topic in machine learning. Graph data comprise two levels that are typically analyzed separately: node-level properties such as the existence of a link between a pair of nodes, and…

机器学习 · 计算机科学 2023-01-18 Kiarash Zahirnia , Oliver Schulte , Parmis Naddaf , Ke Li

We consider the problem of graph generation guided by network statistics, i.e., the generation of graphs which have given values of various numerical measures that characterize networks, such as the clustering coefficient and the number of…

社会与信息网络 · 计算机科学 2023-03-02 Jérôme Kunegis , Jun Sun , Eiko Yoneki

Graph generation is an extremely important task, as graphs are found throughout different areas of science and engineering. In this work, we focus on the modern equivalent of the Erdos-Renyi random graph model: the graph variational…

机器学习 · 计算机科学 2020-02-19 Daniel Flam-Shepherd , Tony Wu , Alan Aspuru-Guzik

Although Graph Neural Networks (GNNs) have become the dominant approach for graph representation learning, their performance on link prediction tasks does not always surpass that of traditional heuristic methods such as Common Neighbors and…

社会与信息网络 · 计算机科学 2025-12-25 Lei Wang , Darong Lai

Graph Networks (GNs) enable the fusion of prior knowledge and relational reasoning with flexible function approximations. In this work, a general GN-based model is proposed which takes full advantage of the relational modeling capabilities…

计算工程、金融与科学 · 计算机科学 2021-07-01 Charilaos Mylonas , Imad Abdallah , Eleni Chatzi

Recently, graph-based algorithms have drawn much attention because of their impressive success in semi-supervised setups. For better model performance, previous studies learn to transform the topology of the input graph. However, these…

社会与信息网络 · 计算机科学 2020-10-15 Chen Li , Xutan Peng , Hao Peng , Jianxin Li , Lihong Wang , Philip S. Yu , Lifang He

Representation learning for graphs enables the application of standard machine learning algorithms and data analysis tools to graph data. Replacing discrete unordered objects such as graph nodes by real-valued vectors is at the heart of…

机器学习 · 计算机科学 2021-02-10 Konstantin Kutzkov

In this paper, we present subgraph2vec, a novel approach for learning latent representations of rooted subgraphs from large graphs inspired by recent advancements in Deep Learning and Graph Kernels. These latent representations encode…

机器学习 · 计算机科学 2016-06-30 Annamalai Narayanan , Mahinthan Chandramohan , Lihui Chen , Yang Liu , Santhoshkumar Saminathan

Graphs serve as fundamental descriptors for systems composed of interacting elements, capturing a wide array of data types, from molecular interactions to social networks and knowledge graphs. In this paper, we present an exhaustive review…

机器学习 · 计算机科学 2024-11-13 Chenqing Hua

Generating graph structures is a challenging problem due to the diverse representations and complex dependencies among nodes. In this paper, we introduce Graph Variational Recurrent Neural Network (GraphVRNN), a probabilistic autoregressive…

机器学习 · 计算机科学 2019-10-07 Shih-Yang Su , Hossein Hajimirsadeghi , Greg Mori

We introduce a family of multilayer graph kernels and establish new links between graph convolutional neural networks and kernel methods. Our approach generalizes convolutional kernel networks to graph-structured data, by representing…

机器学习 · 统计学 2020-06-30 Dexiong Chen , Laurent Jacob , Julien Mairal

Applications based on image retrieval require editing and associating in intermediate spaces that are representative of the high-level concepts like objects and their relationships rather than dense, pixel-level representations like RGB…

计算机视觉与模式识别 · 计算机科学 2022-07-11 Rishi Agarwal , Tirupati Saketh Chandra , Vaidehi Patil , Aniruddha Mahapatra , Kuldeep Kulkarni , Vishwa Vinay

This paper focuses on two fundamental tasks of graph analysis: community detection and node representation learning, which capture the global and local structures of graphs, respectively. In the current literature, these two tasks are…

社会与信息网络 · 计算机科学 2019-09-18 Fan-Yun Sun , Meng Qu , Jordan Hoffmann , Chin-Wei Huang , Jian Tang

In recent years, graph representation learning has gained significant popularity, which aims to generate node embeddings that capture features of graphs. One of the methods to achieve this is employing a technique called random walks that…

机器学习 · 计算机科学 2022-10-13 Deniz Gurevin , Mohsin Shan , Tong Geng , Weiwen Jiang , Caiwen Ding , Omer Khan

Generating realistic graph-structured data is challenging due to discrete connectivity, varying graph sizes, and class-specific structural patterns. Recent Generative Adversarial Networks (GAN)-based graph generation methods improve edge…

机器学习 · 计算机科学 2026-05-29 James Sargant , Seyedeh Ava Razi Razavi , Renata Dividino , Sheridan Houghten

Traditionally, graph neural networks have been trained using a single observed graph. However, the observed graph represents only one possible realization. In many applications, the graph may encounter uncertainties, such as having…

机器学习 · 计算机科学 2024-10-10 See Hian Lee , Feng Ji , Kelin Xia , Wee Peng Tay

Graph embedding has been widely applied in areas such as network analysis, social network mining, recommendation systems, and bioinformatics. However, current graph construction methods often require the prior definition of neighborhood…

机器学习 · 计算机科学 2025-10-08 S. Peng , L. Hu , W. Zhang , B. Jie , Y. Luo

Recently, there has been a surge of interest in employing neural networks for graph generation, a fundamental statistical learning problem with critical applications like molecule design and community analysis. However, most approaches…

机器学习 · 计算机科学 2024-07-31 Yunhui Jang , Seul Lee , Sungsoo Ahn

Modeling and generating graphs is fundamental for studying networks in biology, engineering, and social sciences. However, modeling complex distributions over graphs and then efficiently sampling from these distributions is challenging due…

机器学习 · 计算机科学 2018-06-26 Jiaxuan You , Rex Ying , Xiang Ren , William L. Hamilton , Jure Leskovec