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Ecosystems are formed by networks of species and their interactions. Traditional models of such interactions assume a constant interaction strength between a given pair of species. However, there is often significant trait variation among…

种群与进化 · 定量生物学 2022-05-03 Zachary Jackson , BingKan Xue

Complex networks often have a modular structure, where a number of tightly- connected groups of nodes (modules) have relatively few interconnections. Modularity had been shown to have an important effect on the evolution and stability of…

物理与社会 · 物理学 2014-04-21 Saray Shai , Dror Y. Kenett , Yoed N. Kenett , Miriam Faust , Simon Dobson , Shlomo Havlin

Several networks occurring in real life have modular structures that are arranged in an hierarchical fashion. In this paper, we have proposed a model for such networks, using a stochastic generation method. Using this model we show that,…

物理与社会 · 物理学 2009-03-12 Raj Kumar Pan , Sitabhra Sinha

Ecological networks such as plant-pollinator systems and food webs vary in space and time. This variability includes fluctuations in global network properties such as total number and intensity of interactions but also in the local…

定量方法 · 定量生物学 2022-12-23 Tancredi Caruso , Giulio Virginio Clemente , Matthias C Rillig , Diego Garlaschelli

The discovery of community structure is a common challenge in the analysis of network data. Many methods have been proposed for finding community structure, but few have been proposed for determining whether the structure found is…

数据分析、统计与概率 · 物理学 2008-04-29 Brian Karrer , Elizaveta Levina , M. E. J. Newman

Many networks are complex dynamical systems, where both attributes of nodes and topology of the network (link structure) can change with time. We propose a model of co-evolving networks where both node at- tributes and network structure…

社会与信息网络 · 计算机科学 2011-06-15 Yoon-Sik Cho , Greg Ver Steeg , Aram Galstyan

Community structure is one of the most relevant features encountered in numerous real-world applications of networked systems. Despite the tremendous effort of scientists working on this subject over the past few decades to characterize,…

物理与社会 · 物理学 2019-12-18 Hocine Cherifi , Gergely Palla , Boleslaw K. Szymanski , Xiaoyan Lu

We introduce the Webworld model, which links together the ecological modelling of food web structure with the evolutionary modelling of speciation and extinction events. The model describes dynamics of ecological communities on an…

adap-org · 物理学 2007-05-23 Guido Caldarelli , Paul G. Higgs , Alan J. McKane

In an increasingly connected world, the resilience of networked dynamical systems is important in the fields of ecology, economics, critical infrastructures, and organizational behaviour. Whilst we understand small-scale resilience well,…

适应与自组织系统 · 物理学 2018-08-21 Giannis Moutsinas , Weisi Guo

Most complex systems are nonlinear, relying on emergent behavior from interacting subsystems, often characterized by oscillatory dynamics. Collective oscillatory behavior is essential for the proper functioning of many real world systems.…

适应与自组织系统 · 物理学 2024-07-03 Soumen Majhi , Biswambhar Rakshit , Amit Sharma , Jürgen Kurths , Dibakar Ghosh

Power lines, roadways, pipelines and other physical infrastructure are critical to modern society. These structures may be viewed as spatial networks where geographic distances play a role in the functionality and construction cost of…

物理与社会 · 物理学 2015-06-03 Thomas C. McAndrew , Christopher M. Danforth , James P. Bagrow

Bipartite networks composed of dichotomous node sets are ubiquitous in nature and society. Partly for simplicity's sake, many studies have focused on their projection onto their unipartite versions where one only needs to care about a…

物理与社会 · 物理学 2022-01-03 Sang Hoon Lee

The need to harmonise apparently irreconcilable arrangements in an ecosystem --nestedness and segregation-- has triggered so far different strategies. Methodological refinements, or the inclusion of behavioural preferences to the network…

We study the evolution of a random weighted network with complex nonlinear dynamics at each node, whose activity may cease as a result of interactions with other nodes. Starting from a knowledge of the micro-level behaviour at each node, we…

统计力学 · 物理学 2007-05-23 Sitabhra Sinha , Sudeshna Sinha

We develop a spatially realistic model of mutualistic metacommunities that exploits the joint structure of spatial and interaction networks. This model exhibits a sharp transition between a stable non-null equilibrium state and a global…

种群与进化 · 定量生物学 2022-06-23 Marc Ohlmann , François Munoz , François Massol , Wilfried Thuiller

We introduce a quantitative measure of network bipartivity as a proportion of even to total number of closed walks in the network. Spectral graph theory is used to quantify how close to bipartite a network is and the extent to which…

统计力学 · 物理学 2009-11-11 Ernesto Estrada , Juan A. Rodriguez-Velazquez

It has recently been shown that structural conditions on the reaction network, rather than a 'fine-tuning' of system parameters, often suffice to impart 'absolute concentration robustness' on a wide class of biologically relevant,…

概率论 · 数学 2014-01-20 David F. Anderson , German Enciso , Matthew Johnston

We study species abundance in the empirical plant-pollinator mutualistic networks exhibiting broad degree distributions, with uniform intra-group competition assumed, by the Lotka-Volterra equation. The stability of a fixed point is found…

种群与进化 · 定量生物学 2022-01-25 Hyun Woo Lee , Jae Woo Lee , Deok-Sun Lee

The concept of nestedness, in particular for ecological and economical networks, has been introduced as a structural characteristic of real interacting systems. We suggest that the nestedness is in fact another way to express a mesoscale…

物理与社会 · 物理学 2016-02-22 Sang Hoon Lee

Identifying and explaining the structure of complex networks at different scales has become an important problem across disciplines. At the mesoscale, modular architecture has attracted most of the attention. At the macroscale, other…

物理与社会 · 物理学 2018-11-09 María J. Palazzi , Javier Borge-Holthoefer , Claudio Tessone , Albert Solé-Ribalta