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Imaging demonstrates that preclinical and human tumors are heterogeneous, i.e. a single tumor can exhibit multiple regions that behave differently during both normal development and also in response to treatment. The large variations…

计算机视觉与模式识别 · 计算机科学 2022-09-08 P. D. Tar , N. A. Thacker , J. P. B. O'Connor

Precise knowledge of causal directed acyclic graphs (DAGs) is assumed for standard approaches towards valid adjustment set selection for unbiased estimation, but in practice, the DAG is often inferred from data or expert knowledge,…

统计理论 · 数学 2025-11-14 Zhongyi Hu , Stéphanie van der Pas

Ordinal variables, such as on the Likert scale, are common in applied research. Yet, existing methods for causal inference tend to target nominal or continuous data. When applied to ordinal data, this fails to account for the inherent…

统计方法学 · 统计学 2025-02-26 Martina Scauda , Jack Kuipers , Giusi Moffa

Current approaches for modeling discrete-valued outcomes associated with spatially-dependent areal units incur computational and theoretical challenges, especially in the Bayesian setting when full posterior inference is desired. As an…

统计方法学 · 统计学 2025-05-22 J. Brandon Carter , Catherine A. Calder

In this work we present a method for the statistical analysis of continually monitored data arising in a recurrent diseases problem. The model enables individual level inference in the presence of time transience and population…

应用统计 · 统计学 2014-11-19 Madhuchhanda Bhattacharjee , Elja Arjas

We propose a unified class of generalized structural equation models (GSEMs) with data of mixed types in mediation analysis, including continuous, categorical, and count variables. Such models extend substantially the classical linear…

统计方法学 · 统计学 2023-12-05 Wei Hao , Canyi Chen , Peter X. -K. Song

Heterogeneity is a hallmark of complex diseases. Regression-based heterogeneity analysis, which is directly concerned with outcome-feature relationships, has led to a deeper understanding of disease biology. Such an analysis identifies the…

统计方法学 · 统计学 2022-11-29 Ziye Luo , Xinyue Yao , Yifan Sun , Xinyan Fan

A discrete Bayesian network is a directed acyclic graph (DAG) consisting of categorical variables. Two popular approaches for DBN modeling include classification and nonparametric methods. However, both methods often require a large number…

统计方法学 · 统计学 2026-04-29 Alexander Dombowsky , David B. Dunson

Joint models have proven to be an effective approach for uncovering potentially hidden connections between various types of outcomes, mainly continuous, time-to-event, and binary. Typically, longitudinal continuous outcomes are…

Directed acyclic graphs (DAGs) are commonly used to model causal relationships among random variables. In general, learning the DAG structure is both computationally and statistically challenging. Moreover, without additional information,…

机器学习 · 统计学 2024-03-26 Ali Shojaie , Wenyu Chen

We consider comparisons of statistical learning algorithms using multiple data sets, via leave-one-in cross-study validation: each of the algorithms is trained on one data set; the resulting model is then validated on each remaining data…

应用统计 · 统计学 2015-06-02 Lorenzo Trippa , Levi Waldron , Curtis Huttenhower , Giovanni Parmigiani

To represent the causal relationships between variables, a directed acyclic graph (DAG) is widely utilized in many areas, such as social sciences, epidemics, and genetics. Many causal structure learning approaches are developed to learn the…

机器学习 · 统计学 2025-01-14 Jianian Wang , Rui Song

Deep learning models have shown promising performance for cell nucleus segmentation in the field of pathology image analysis. However, training a robust model from multiple domains remains a great challenge for cell nucleus segmentation.…

图像与视频处理 · 电气工程与系统科学 2024-03-12 Dawei Fan , Yifan Gao , Jiaming Yu , Yanping Chen , Wencheng Li , Chuancong Lin , Kaibin Li , Changcai Yang , Riqing Chen , Lifang Wei

Discovering causal genetic variants from large genetic association studies poses many difficult challenges. Assessing which genetic markers are involved in determining trait status is a computationally demanding task, especially in the…

基因组学 · 定量生物学 2015-04-09 Andrew L. Beam , Alison Motsinger-Reif , Jon Doyle

Amidst the rapid expansion of Machine Learning (ML) and Large Language Models (LLMs), understanding the semantics within their mechanisms is vital. Causal analyses define semantics, while gradient-based methods are essential to eXplainable…

人工智能 · 计算机科学 2024-03-26 Yosuke Miyanishi , Minh Le Nguyen

A well-studied challenge that arises in the structure learning problem of causal directed acyclic graphs (DAG) is that using observational data, one can only learn the graph up to a "Markov equivalence class" (MEC). The remaining undirected…

机器学习 · 计算机科学 2022-05-20 Vibhor Porwal , Piyush Srivastava , Gaurav Sinha

Probabilistic machine learning models are often insufficient to help with decisions on interventions because those models find correlations - not causal relationships. If observational data is only available and experimentation are…

人工智能 · 计算机科学 2021-05-13 Marios Papamichalis , Abhishek Ray , Ilias Bilionis , Karthik Kannan , Rajiv Krishnamurthy

Clustering multivariate data is a pervasive task in many applied problems, particularly in social studies and life science. Model-based approaches to clustering rely on mixture models, where each mixture component corresponds to the kernel…

统计方法学 · 统计学 2026-01-22 Laura Ferrini , Federico Castelletti

Disease mapping is an important statistical tool used by epidemiologists to assess geographic variation in disease rates and identify lurking environmental risk factors from spatial patterns. Such maps rely upon spatial models for…

统计方法学 · 统计学 2021-02-08 Leiwen Gao , Abhirup Datta , Sudipto Banerjee

INTRODUCTION: Previous studies have applied normative modeling on a single neuroimaging modality to investigate Alzheimer Disease (AD) heterogeneity. We employed a deep learning-based multimodal normative framework to analyze…