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Most algorithms for computing persistent homology do so by tracking cycles that represent homology classes. There are many choices of such cycles, and specific choices have found different uses in applications. Although it is known that…

代数拓扑 · 数学 2025-04-01 Dmitriy Morozov , Primoz Skraba

Persistent homology is a popular and powerful tool for capturing topological features of data. Advances in algorithms for computing persistent homology have reduced the computation time drastically -- as long as the algorithm does not…

计算几何 · 计算机科学 2013-10-03 Ulrich Bauer , Michael Kerber , Jan Reininghaus

Cohomological ideas have recently been injected into persistent homology and have for example been used for accelerating the calculation of persistence diagrams by the software Ripser. The cup product operation which is available at…

代数拓扑 · 数学 2022-12-20 Marco Contessoto , Facundo Mémoli , Anastasios Stefanou , Ling Zhou

This article introduces an algorithm to compute the persistent homology of a filtered complex with various coefficient fields in a single matrix reduction. The algorithm is output-sensitive in the total number of distinct persistent…

计算几何 · 计算机科学 2020-01-10 Jean-Daniel Boissonnat , Clément Maria

Persistent (co)homology is a central construction in topological data analysis, where it is used to quantify prominence of features in data to produce stable descriptors suitable for downstream analysis. Persistence is challenging to…

计算几何 · 计算机科学 2024-10-23 Arnur Nigmetov , Dmitriy Morozov

In this paper we present a new approach to computing homology (with field coefficients) and persistent homology. We use concepts from discrete Morse theory, to provide an algorithm which can be expressed solely in terms of simple graph…

代数拓扑 · 数学 2012-10-26 Paweł Dłotko , Hubert Wagner

Persistent homology (PH) is one of the main methods used in Topological Data Analysis. An active area of research in the field is the study of appropriate notions of PH representatives, which allow to interpret the meaning of the…

代数拓扑 · 数学 2024-12-12 Antonio Leitao , Nina Otter

This paper aims to introduce a filtration analysis of sampled maps based on persistent homology, providing a new method for reconstructing the underlying maps. The key idea is to extend the definition of homology induced maps of…

代数拓扑 · 数学 2019-12-19 Hiroshi Takeuchi

Zigzag persistent homology is a powerful generalisation of persistent homology that allows one not only to compute persistence diagrams with less noise and using less memory, but also to use persistence in new fields of application.…

计算几何 · 计算机科学 2016-08-23 Clément Maria , Steve Oudot

Persistent homology is a multiscale method for analyzing the shape of sets and functions from point cloud data arising from an unknown distribution supported on those sets. When the size of the sample is large, direct computation of the…

Assume that a finite set of points is randomly sampled from a subspace of a metric space. Recent advances in computational topology have provided several approaches to recovering the geometric and topological properties of the underlying…

代数拓扑 · 数学 2021-01-29 Peter Bubenik , Peter T. Kim

Persistent homology is a topological feature used in a variety of applications such as generating features for data analysis and penalizing optimization problems. We develop an approach to accelerate persistent homology computations…

代数拓扑 · 数学 2023-01-19 Yuan Luo , Bradley J. Nelson

Persistent homology, a technique from computational topology, has recently shown strong empirical performance in the context of graph classification. Being able to capture long range graph properties via higher-order topological features,…

机器学习 · 计算机科学 2024-12-20 Rubén Ballester , Bastian Rieck

With the growing availability of efficient tools, persistent homology is becoming a useful methodology in a variety of applications. Significant work has been devoted to implementing tools for persistent homology diagrams; however,…

代数拓扑 · 数学 2024-03-08 Tuyen Pham , Hubert Wagner

Persistent homology is an important methodology in topological data analysis which adapts theory from algebraic topology to data settings. Computing persistent homology produces persistence diagrams, which have been successfully used in…

机器学习 · 统计学 2026-01-13 Yueqi Cao , Anthea Monod

Persistent homology is a method for computing the topological features present in a given data. Recently, there has been much interest in the integration of persistent homology as a computational step in neural networks or deep learning. In…

机器学习 · 计算机科学 2020-11-17 Padraig Corcoran , Bailin Deng

We present a parallelizable algorithm for computing the persistent homology of a filtered chain complex. Our approach differs from the commonly used reduction algorithm by first computing persistence pairs within local chunks, then…

代数拓扑 · 数学 2013-03-05 Ulrich Bauer , Michael Kerber , Jan Reininghaus

We present an algorithm for computing the barcode of the image of a morphisms in persistent homology induced by an inclusion of filtered finite-dimensional chain complexes. These algorithms make use of the clearing optimization and can be…

代数拓扑 · 数学 2022-01-13 Ulrich Bauer , Maximilian Schmahl

Persistent homology is a mathematical tool used for studying the shape of data by extracting its topological features. It has gained popularity in network science due to its applicability in various network mining problems, including…

代数拓扑 · 数学 2023-06-21 Mehmet Emin Aktas , Thu Nguyen , Rakin Riza , Muhammad Ifte Islam , Esra Akbas

The persistent homology with coefficients in a field F coincides with the same for cohomology because of duality. We propose an implementation of a recently introduced algorithm for persistent cohomology that attaches annotation vectors…

计算几何 · 计算机科学 2020-01-09 Jean-Daniel Boissonnat , Tamal K. Dey , Clément Maria
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