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We consider the problem of clustering misaligned curves. According to our similarity measure, two curves are considered similar if they have the same shape after being aligned, and the warping function does not differ from the identity…

统计方法学 · 统计学 2018-01-03 Yu-Hsiang Cheng , Tzee-Ming Huang , Su-Fen Yang

In the biclustering problem, we seek to simultaneously group observations and features. While biclustering has applications in a wide array of domains, ranging from text mining to collaborative filtering, the problem of identifying…

统计方法学 · 统计学 2018-06-07 Eric C. Chi , Genevera I. Allen , Richard G. Baraniuk

We propose a new approach for clustering DNA features using array CGH data from multiple tumor samples. We distinguish data-collapsing: joining contiguous DNA clones or probes with extremely similar data into regions, from clustering:…

应用统计 · 统计学 2010-12-21 Kyung In Kim , Etienne Roquain , Mark Van De Wiel

Transmitter localization in Molecular Communication via Diffusion is a critical topic with many applications. However, accurate localization of multiple transmitters is a challenging problem due to the stochastic nature of diffusion and…

机器学习 · 计算机科学 2025-11-12 Ali Sonmez , Erencem Ozbey , Efe Feyzi Mantaroglu , H. Birkan Yilmaz

Clustering is an unsupervised learning problem that aims to partition unlabelled data points into groups with similar features. Traditional clustering algorithms provide limited insight into the groups they find as their main focus is…

机器学习 · 计算机科学 2022-10-18 Connor Lawless , Oktay Gunluk

Currently, data-driven discovery in biological sciences resides in finding segmentation strategies in multivariate data that produce sensible descriptions of the data. Clustering is but one of several approaches and sometimes falls short…

定量方法 · 定量生物学 2022-08-12 Richard Tjörnhammar

We introduce a tensor-based clustering method to extract sparse, low-dimensional structure from high-dimensional, multi-indexed datasets. This framework is designed to enable detection of clusters of data in the presence of structural…

定量方法 · 定量生物学 2019-02-11 Anna Seigal , Mariano Beguerisse-Díaz , Birgit Schoeberl , Mario Niepel , Heather A. Harrington

In cluster tomography, we propose measuring the number of clusters $N$ intersected by a line segment of length $\ell$ across a finite sample. As expected, the leading order of $N(\ell)$ scales as $a\ell$, where $a$ depends on microscopic…

无序系统与神经网络 · 物理学 2024-02-13 Helen S. Ansell , Samuel J. Frank , István A. Kovács

We present a novel coupled two-way clustering approach to gene microarray data analysis. The main idea is to identify subsets of the genes and samples, such that when one of these is used to cluster the other, stable and significant…

生物物理 · 物理学 2009-11-06 G. Getz , E. Levine , E. Domany

The structure of defect clusters formed in a displacement cascade plays a significant role in the micro-structural evolution during irradiation. Molecular dynamics simulations have been widely used to study collision cascades and subsequent…

计算物理 · 物理学 2024-02-02 Utkarsh Bhardwaj , Andrea E. Sand , Manoj Warrier

Bi-clustering is a useful approach in analyzing biological data when observations come from heterogeneous groups and have a large number of features. We outline a general Bayesian approach in tackling bi-clustering problems in moderate to…

应用统计 · 统计学 2021-02-11 Han Yan , Jiexing Wu , Yang Li , Jun S. Liu

With the recent popularity of graphical clustering methods, there has been an increased focus on the information between samples. We show how learning cluster structure using edge features naturally and simultaneously determines the most…

机器学习 · 统计学 2016-05-09 Matt Barnes , Artur Dubrawski

In many fields, researchers are interested in large and complex biological processes. Two important examples are gene expression and DNA methylation in genetics. One key problem is to identify aberrant patterns of these processes and…

应用统计 · 统计学 2012-10-03 Matthias Kormaksson , James G. Booth , Maria E. Figueroa , Ari Melnick

Data clustering has been widely used in data analysis and classification. In the present work, a method based on dynamic quantum clustering is proposed for the segmentation and analysis of brain tumor MRI. The results open the possibility…

医学物理 · 物理学 2021-07-27 Jacksson Sanchez , Miguel Martin Landrove

Clustering methods are applied regularly in the bibliometric literature to identify research areas or scientific fields. These methods are for instance used to group publications into clusters based on their relations in a citation network.…

数字图书馆 · 计算机科学 2016-05-02 Lovro Šubelj , Nees Jan van Eck , Ludo Waltman

Clustering analysis of functional data, which comprises observations that evolve continuously over time or space, has gained increasing attention across various scientific disciplines. Practical applications often involve functional data…

统计方法学 · 统计学 2024-06-19 Tingyu Zhu , Lan Xue , Carmen Tekwe , Keith Diaz , Mark Benden , Roger Zoh

Classification and clustering have been studied separately in machine learning and computer vision. Inspired by the recent success of deep learning models in solving various vision problems (e.g., object recognition, semantic segmentation)…

机器学习 · 计算机科学 2017-12-13 Ali Borji , Aysegul Dundar

Discrete mixture models provide a well-known basis for effective clustering algorithms, although technical challenges have limited their scope. In the context of gene-expression data analysis, a model is presented that mixes over a finite…

统计方法学 · 统计学 2012-11-12 Michael A. Newton , Lisa M. Chung

We propose a spectral clustering method based on local principal components analysis (PCA). After performing local PCA in selected neighborhoods, the algorithm builds a nearest neighbor graph weighted according to a discrepancy between the…

机器学习 · 统计学 2019-04-09 Ery Arias-Castro , Gilad Lerman , Teng Zhang

Clustering analysis identifies samples as groups based on either their mutual closeness or homogeneity. In order to detect clusters in arbitrary shapes, a novel and generic solution based on boundary erosion is proposed. The clusters are…

计算机视觉与模式识别 · 计算机科学 2018-04-16 Cheng-Hao Deng , Wan-Lei Zhao