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The intracellular transport process plays an important role in delivering essential materials throughout branched geometries of neurons for their survival and function. Many neurodegenerative diseases have been associated with the…

生物物理 · 物理学 2021-08-31 Angran Li , Yongjie Jessica Zhang

Neurons exhibit intricate geometries within their neurite networks, which play a crucial role in processes such as signaling and nutrient transport. Accurate simulation of material transport in the networks is essential for understanding…

机器学习 · 计算机科学 2025-07-16 Tsung Yeh Hsieh , Yongjie Jessica Zhang

Neuron growth is a complex, multi-stage process that develops sophisticated morphologies and interwoven neurite networks. Recent advances have enabled us to examine the effects of neuron growth factors and seek causes for neurodegenerative…

Machine learning (ML) and deep learning (DL) techniques have gained significant attention as reduced order models (ROMs) to computationally expensive structural analysis methods, such as finite element analysis (FEA). Graph neural network…

机器学习 · 计算机科学 2023-09-25 Yuecheng Cai , Jasmin Jelovica

Accurately predicting adsorption properties in nanoporous materials using Deep Learning models remains a challenging task. This challenge becomes even more pronounced when attempting to generalize to structures that were not part of the…

Graph neural networks (GNNs) are a popular class of machine learning models whose major advantage is their ability to incorporate a sparse and discrete dependency structure between data points. Unfortunately, GNNs can only be used when such…

机器学习 · 计算机科学 2020-06-22 Luca Franceschi , Mathias Niepert , Massimiliano Pontil , Xiao He

Here we present a machine learning framework and model implementation that can learn to simulate a wide variety of challenging physical domains, involving fluids, rigid solids, and deformable materials interacting with one another. Our…

机器学习 · 计算机科学 2020-09-15 Alvaro Sanchez-Gonzalez , Jonathan Godwin , Tobias Pfaff , Rex Ying , Jure Leskovec , Peter W. Battaglia

Modern microelectronic devices are composed of interfaces between a large number of materials, many of which are in amorphous or polycrystalline phases. Modeling such non-crystalline materials using first-principles methods such as density…

材料科学 · 物理学 2023-10-12 Pratik Brahma , Krishnakumar Bhattaram , Sayeef Salahuddin

Graph neural networks (GNNs) are designed to extract latent patterns from graph-structured data, making them particularly well suited for crystal representation learning. Here, we propose a GNN model tailored for estimating electronic…

材料科学 · 物理学 2026-04-07 Yuxuan Zeng , Wei Cao , Yijing Zuo , Fang Lyu , Wenhao Xie , Tan Peng , Yue Hou , Ling Miao , Ziyu Wang , Jing Shi

Understanding and predicting interface diffusion phenomena in materials is crucial for various industrial applications, including semiconductor manufacturing, battery technology, and catalysis. In this study, we propose a novel approach…

材料科学 · 物理学 2025-01-13 Zirui Zhao , Hai-Feng Li

Graph Neural Networks (GNNs) have become a central tool for learning on graph-structured data, yet their applicability to real-world systems remains limited by key challenges such as scalability, temporality, directionality, data…

机器学习 · 计算机科学 2025-10-28 Emanuele Rossi

Graph Neural Networks (GNN) can capture the geometric properties of neural representations in EEG data. Here we utilise those to study how reinforcement-based motor learning affects neural activity patterns during motor planning, leveraging…

机器学习 · 计算机科学 2024-11-01 Federico Nardi , Jinpei Han , Shlomi Haar , A. Aldo Faisal

In the past three decades, a wide array of computational methodologies and simulation frameworks has emerged to address the complexities of modeling multi-phase flow and transport processes in fractured porous media. The conformal mesh…

机器学习 · 计算机科学 2025-02-26 Mohammed Al Kobaisi , Wenjuan Zhang , Waleed Diab , Hadi Hajibeygi

Graph neural networks (GNNs) build on the success of deep learning models by extending them for use in graph spaces. Transfer learning has proven extremely successful for traditional deep learning problems: resulting in faster training and…

机器学习 · 计算机科学 2022-02-03 Nishai Kooverjee , Steven James , Terence van Zyl

Network modeling is a key enabler to achieve efficient network operation in future self-driving Software-Defined Networks. However, we still lack functional network models able to produce accurate predictions of Key Performance Indicators…

网络与互联网体系结构 · 计算机科学 2021-06-15 Krzysztof Rusek , José Suárez-Varela , Paul Almasan , Pere Barlet-Ros , Albert Cabellos-Aparicio

Currently the state of the art network models are based or depend on Discrete Event Simulation (DES). While DES is highly accurate, it is also computationally costly and cumbersome to parallelize, making it unpractical to simulate high…

网络与互联网体系结构 · 计算机科学 2023-10-19 Carlos Güemes-Palau , Miquel Ferriol Galmés , Albert Cabellos-Aparicio , Pere Barlet-Ros

Structural and topological information play a key role in modeling flow and transport through fractured rock in the subsurface. Discrete fracture network (DFN) computational suites such as dfnWorks are designed to simulate flow and…

Mobile networks consist of interconnected radio nodes strategically positioned across various geographical regions to provide connectivity services. The set of relations between these radio nodes, referred to as the \emph{mobile network…

机器学习 · 计算机科学 2025-04-22 Felix Nannesson Meli , Johan Tell , Shirwan Piroti , Tahar Zanouda , Elias Jarlebring

Graph Neural Networks (GNNs) are a promising deep learning approach for circumventing many real-world problems on graph-structured data. However, these models usually have at least one of four fundamental limitations: over-smoothing,…

机器学习 · 计算机科学 2022-10-03 Xun Liu , Alex Hay-Man Ng , Fangyuan Lei , Yikuan Zhang , Zhengmin Li

A graph neural network (GCN) is employed in the deep energy method (DEM) model to solve the momentum balance equation in 3D for the deformation of linear elastic and hyperelastic materials due to its ability to handle irregular domains over…

计算工程、金融与科学 · 计算机科学 2022-10-21 Junyan He , Diab Abueidda , Seid Koric , Iwona Jasiuk
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