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Despite recent advances in artificial cilia technologies, the application of metachrony, which is the collective wavelike motion by cilia moving out-of-phase, has been severely hampered by difficulties in controlling densely packed…

We introduce a measure for energetic efficiency of biological cilia acting individually or collectively and numerically determine the optimal beating patterns according to this criterion. Maximizing the efficiency of a single cilium leads…

生物物理 · 物理学 2011-09-21 Natan Osterman , Andrej Vilfan

The basic units in our brain are neurons and each neuron has more than 1000 synapse connections. Synapse is the basic structure for information transfer in an ever-changing manner, and short-term plasticity allows synapses to perform…

材料科学 · 物理学 2014-03-05 Li Qiang Zhu , Chang Jin Wan , Li Qiang Guo , Yi Shi , Qing Wan

The cells and tissues that make up our body juggle contradictory mechanical demands. It is crucial for their survival to be able to withstand large mechanical loads, but it is equally crucial for them to produce forces and actively change…

Nonequilibrium dynamics of biomembranes with active inclusions is considered. The inclusions represent protein molecules which perform cyclic internal conformational motions driven by the energy brought with ATP ligands. As protein…

软凝聚态物质 · 物理学 2015-05-13 Hsuan-Yi Chen , Alexander S. Mikhailov

The study of synchronization in biological systems is essential for the understanding of the rhythmic phenomena of living organisms at both molecular and cellular levels. In this paper, by using simple dynamical systems theory, we present a…

分子网络 · 定量生物学 2007-05-23 Chunguang Li , Luonan Chen , Kazuyuki Aihara

Monotone systems constitute one of the most important classes of dynamical systems used in mathematical biology modeling. The objective of this paper is to extend the notion of monotonicity to systems with inputs and outputs, a necessary…

最优化与控制 · 数学 2007-05-23 David Angeli , Eduardo D. Sontag

Symmetry lies at the heart of 2D bioelectronics, determining material properties at the fundamental level. Breaking the symmetry allows emergent functionalities and effects. However, symmetry modulation in 2D bioelectronics and the…

Currently, biological signaling is envisaged as a combination of activation and movement, triggered by local molecular interactions and molecular diffusion, respectively. However, we here suggest, that other fundamental physical mechanisms…

生物物理 · 物理学 2018-05-22 B. Fichtl , I. Silman , M. F. Schneider

Active matter consists of units that generate mechanical work by consuming energy. Examples include living systems, such as assemblies of bacteria and biological tissues, biopolymers driven by molecular motors, and suspensions of synthetic…

软凝聚态物质 · 物理学 2021-02-04 Song Liu , Suraj Shankar , M. Cristina Marchetti , Yilin Wu

Within cells, vesicles and proteins are actively transported several micrometers along the cytoskeletal filaments. The transport along microtubules is propelled by dynein and kinesin motors, which carry the cargo in opposite directions.…

生物物理 · 物理学 2020-05-20 Robin Jose , Ludger Santen

Cytoskeletal filaments are capable of self-assembly in the absence of externally supplied chemical energy, but the rapid turnover rates essential for their biological function require a constant flux of ATP or GTP hydrolysis. The same is…

生物物理 · 物理学 2019-08-26 Robert Marsland , Jeremy England

Fluid-structure interactions between active and passive components are important for many biological systems to function. A particular example is chromatin in the cell nucleus, where ATP-powered processes drive coherent motions of the…

软凝聚态物质 · 物理学 2024-02-15 Scott Weady , David B. Stein , Alexandra Zidovska , Michael J. Shelley

Living cells exhibit an important out-of-equilibrium mechanical activity, mainly due to the forces generated by molecular motors. These motor proteins, acting individually or collectively on the cytoskeleton, contribute to the violation of…

生物物理 · 物理学 2009-01-21 Francois Gallet , Delphine Arcizet , Pierre Bohec , Alain Richert

Replication through cell division is one of the most fundamental processes of life and a major driver of dynamics in systems ranging from bacterial colonies to embryogenesis, tissues and tumors. While regulation often plays a role in…

软凝聚态物质 · 物理学 2024-10-21 Lukas Hupe , Yoav G. Pollack , Jonas Isensee , Aboutaleb Amiri , Ramin Golestanian , Philip Bittihn

We investigate the behavior of self-propelled particles under cyclic stretching, inspired by the characteristic pattern dynamics observed in microtubule (MT) motility assays subjected to uniaxial cyclic substrate stretching. We develop a…

软凝聚态物质 · 物理学 2025-05-27 Takumi Tagaki , Seiya Nishikawa , Shuji Ishihara

The molecular motor protein kinesin plays a key role in fundamental cellular processes such as intracellular transport, mitotic spindle formation, and cytokinesis, with important implications for neurodegenerative and cancer disease…

生物大分子 · 定量生物学 2014-11-18 B. D. Jacobson , L. J. Herskowitz , S. J. Koch , S. R. Atlas

The reproduction of a living cell requires a repeatable set of chemical events to be properly coordinated. Such events define a replication cycle, coupling the growth and shape change of the cell membrane with internal metabolic reactions.…

细胞行为 · 定量生物学 2007-05-23 J. Macia , R. V. Sole

Symmetry principles play an important role in geometry, and physics, allowing for the reduction of complicated systems to simpler, more comprehensible models that preserve the system's features of interest. Biological systems are often…

细胞行为 · 定量生物学 2025-02-26 Luis A. Álvarez-García , Wolfram Liebermeister , Ian Leifer , Hernán A. Makse

Models of active nematics in biological systems normally require complexity arising from the hydrodynamics involved at the microscopic level as well as the viscoelastic nature of the system. Here we show that a minimal, space-independent,…

软凝聚态物质 · 物理学 2022-06-27 Emmanuel L. C. VI M. Plan , Huong Le Thi , Julia M. Yeomans , Amin Doostmohammadi
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